myRT

myRT report for GCA_012522115.1_ASM1252211v1

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Seq: JAAYLB010000027.1 Firmicutes bacterium isolate AS15tlH2ME_125 19366_AS15, whole genome shotgun sequence (34030 bp)
Overview 1 RT 1: 12056-16151 bp Neighborhood of RT #1 [12056, 16151] pfam03781 Avd_like RVT-DGRs Feature: gene Location: 12056-13525 bp Feature: domain Description: pfam03781 Location: 12212-12680 bp Feature: domain Description: pfam03781 Location: 1 221 2-1 2680 bp Feature: gene Location: 13650-13949 bp Feature: domain Description: Avd_like Location: 13653-13938 bp Feature: domain Description: Avd_like Location: 1 3653-1 3938 bp Feature: gene Location: 14288-15385 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 14513-15131 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1 451 3-1 51 31 bp Feature: gene Location: 15462-15767 bp Feature: gene Location: 15840-16151 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT pfam03781 (FGE-sulfatase;Sulfatase-modifying factor enzyme 1), Avd_like (cd16376), RVT-DGRs

Seq: JAAYLB010000081.1 Firmicutes bacterium isolate AS15tlH2ME_125 52153_AS15, whole genome shotgun sequence (17432 bp)
Overview 1 RT 1: 5406-9047 bp Neighborhood of RT #1 [5406, 9047] M14_CP_Csd4-like RVT-GII DUF501 GppA Feature: gene Location: 5406-6269 bp Feature: domain Description: M14_CP_Csd4-like Location: 5649-5994 bp Feature: domain Description: M14_CP_Csd4-like Location: 5649-5994 bp Feature: gene Location: 6495-6734 bp Feature: gene Location: 6773-7027 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6848-6992 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6848-6992 bp Feature: gene Location: 7167-8750 bp Feature: domain Description: DUF501 Location: 7221-7653 bp Feature: domain Description: DUF501 Location: 72 2 1-7653 bp Feature: domain Description: GppA Location: 7794-8721 bp Feature: domain Description: GppA Location: 7794-872 1 bp Feature: gene Location: 8898-9047 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT M14_CP_Csd4-like (cd06243), RVT-GII, DUF501 (pfam04417), GppA (COG0248)

Seq: JAAYLB010000088.1 Firmicutes bacterium isolate AS15tlH2ME_125 58135_AS15, whole genome shotgun sequence (10213 bp)
Overview 1 RT 1: 8076-9735 bp Neighborhood of RT #1 [8076, 9899] group_II_RT_mat RVT-GII GIIM Feature: gene Location: 8076-8258 bp Feature: gene Location: 8628-8831 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 8673-8829 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 8673 -8829 bp Feature: gene Location: 8883-9899 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8889-9462 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8889-9462 bp Feature: domain Description: GIIM Note: maturase Location: 9504-9735 bp Feature: domain Description: GIIM Note: maturase Location: 9504-973 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT group_II_RT_mat (TIGR04416), RVT-GII, GIIM (pfam08388)

Seq: JAAYLB010000090.1 Firmicutes bacterium isolate AS15tlH2ME_125 60560_AS15, whole genome shotgun sequence (2439 bp)
Overview 1 RT 1: 170-2433 bp Neighborhood of RT #1 [170, 2438] RVT-DGRs LolE LolE Feature: gene Location: 170-553 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 173-329 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 173-329 bp Feature: gene Location: 587-1798 bp Feature: domain Description: LolE Location: 596-1679 bp Feature: domain Description: LolE Location: 596-1679 bp Feature: gene Location: 1824-2438 bp Feature: domain Description: LolE Location: 1827-2433 bp Feature: domain Description: LolE Location: 1827-24 33 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, LolE (COG4591)

Seq: JAAYLB010000107.1 Firmicutes bacterium isolate AS15tlH2ME_125 71589_AS15, whole genome shotgun sequence (14305 bp)
Overview 1 RT 1: 10071-13948 bp Neighborhood of RT #1 [10071, 13948] AmiC RVT-GII GIIM group_II_RT_mat RVT-GII Feature: gene Location: 10071-11087 bp Feature: domain Description: AmiC Location: 10074-10611 bp Feature: domain Description: AmiC Location: 10074-10611 bp Feature: gene Location: 11133-11306 bp Feature: gene Location: 11423-11860 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11429-11651 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11429-1165 1 bp Feature: domain Description: GIIM Note: maturase Location: 11687-11858 bp Feature: domain Description: GIIM Note: maturase Location: 11687-1185 8 bp Feature: gene Location: 11891-12133 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 11915-11999 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 11915 -11999 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12023-12086 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12023-12086 bp Feature: gene Location: 12470-13363 bp Feature: gene Location: 13424-13948 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AmiC (COG0860), RVT-GII, GIIM (pfam08388), group_II_RT_mat (TIGR04416)

Seq: JAAYLB010000110.1 Firmicutes bacterium isolate AS15tlH2ME_125 73624_AS15, whole genome shotgun sequence (24002 bp)
Overview 1 RT 1: 21035-23689 bp Neighborhood of RT #1 [21035, 23689] YbjL YbjL RVT-GII GIIM Feature: gene Location: 21035-22222 bp Feature: domain Description: YbjL Location: 21059-21644 bp Feature: domain Description: YbjL Location: 21059-216 44 bp Feature: domain Description: YbjL Location: 21680-22214 bp Feature: domain Description: YbjL Location: 216 80-22214 bp Feature: gene Location: 22232-22438 bp Feature: gene Location: 22490-23248 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22499-23024 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22499-23024 bp Feature: domain Description: GIIM Note: maturase Location: 23075-23246 bp Feature: domain Description: GIIM Note: maturase Location: 23075-23246 bp Feature: gene Location: 23240-23689 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YbjL (COG2985), RVT-GII, GIIM (pfam08388)