myRT

myRT report for GCA_012584435.1_ASM1258443v1

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Seq: JABAEK010000011.1 Marinomonas sp. M1K-6 NODE_11_length_122778_cov_273.189550, whole genome shotgun sequence (122778 bp)
Overview 1 RT 1: 120058-122776 bp Neighborhood of RT #1 [120058, 122776] IS5 RVT_N RVT-GII Feature: gene Location: 120058-120465 bp Feature: domain Description: IS5 Location: 120061-120451 bp Feature: domain Description: IS5 Location: 1 20061 -1 20451 bp Feature: gene Location: 120696-120887 bp Feature: gene Location: 120912-122093 bp Feature: RT Description: RVT_N Location: 120987-121218 bp Feature: RT Description: RVT_N Location: 1 20987-1 21 21 8 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 121275-121917 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 21 275-1 21 91 7 bp Feature: gene Location: 122134-122547 bp Feature: gene Location: 122597-122776 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT IS5 (COG3039), RVT_N (pfam13655), RVT-GII

Seq: JABAEK010000044.1 Marinomonas sp. M1K-6 NODE_44_length_1800_cov_603.282647, whole genome shotgun sequence (1800 bp)
Overview 1 RT 1: 512-1664 bp Neighborhood of RT #1 [512, 1762] RVT-GII GIIM Feature: gene Location: 512-1762 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 713-1370 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 713-1370 bp Feature: domain Description: GIIM Note: maturase Location: 1448-1664 bp Feature: domain Description: GIIM Note: maturase Location: 1448-1664 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: JABAEK010000055.1 Marinomonas sp. M1K-6 NODE_55_length_633_cov_1.706835, whole genome shotgun sequence (633 bp)
Overview 1 RT 1: 2-530 bp Neighborhood of RT #1 [2, 631] RVT-GII Intron_maturas2 Feature: gene Location: 2-631 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5-170 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5-170 bp Feature: domain Description: Intron_maturas2 Location: 257-530 bp Feature: domain Description: Intron_maturas2 Location: 257-53 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348)

Seq: JABAEK010000006.1 Marinomonas sp. M1K-6 NODE_6_length_153536_cov_304.051049, whole genome shotgun sequence (153536 bp)
Overview 1 RT 1: 22067-25539 bp Neighborhood of RT #1 [22067, 26006] RVT-DGRs Avd_like pfam03781 Feature: gene Location: 22067-22624 bp Feature: gene Location: 22808-23077 bp Feature: gene Location: 23055-24347 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 23496-24120 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 234 96-24 120 bp Feature: gene Location: 24347-24712 bp Feature: domain Description: Avd_like Location: 24383-24683 bp Feature: domain Description: Avd_like Location: 24 383-24 683 bp Feature: gene Location: 24774-26006 bp Feature: domain Description: pfam03781 Location: 25218-25539 bp Feature: domain Description: pfam03781 Location: 25218-25539 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, Avd_like (cd16376), pfam03781 (FGE-sulfatase;Sulfatase-modifying factor enzyme 1)