myRT

myRT report for GCA_012641465.1_ASM1264146v1

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Seq: JABAIK010000001.1 Vibrio sp. SM6 Scaffold1, whole genome shotgun sequence (461004 bp)
Overview 1 RT 1: 235541-242428 bp Neighborhood of RT #1 [235541, 242454] PRK07986 RVT-UG7 PRK05431 RarA Feature: gene Location: 235541-236833 bp Feature: domain Description: PRK07986 Location: 235544-236813 bp Feature: domain Description: PRK07986 Location: 235544-23681 3 bp Feature: gene Location: 237175-237429 bp Feature: gene Location: 237551-239185 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 238028-238448 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 238028-238448 bp Feature: gene Location: 239689-241098 bp Feature: domain Description: PRK05431 Location: 239794-241093 bp Feature: domain Description: PRK05431 Location: 239794-241 093 bp Feature: gene Location: 241105-242454 bp Feature: domain Description: RarA Location: 241138-242428 bp Feature: domain Description: RarA Location: 241 1 38-242428 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK07986 (adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated), RVT-UG7, PRK05431 (seryl-tRNA synthetase; Provisional), RarA (COG2256)

Seq: JABAIK010000014.1 Vibrio sp. SM6 Scaffold14, whole genome shotgun sequence (108386 bp)
Overview 1 RT 1: 82907-89024 bp Neighborhood of RT #1 [82907, 89041] groEL RVT_N RVT-GII GIIM HNH EFP_modif_epmB Feature: gene Location: 82907-84553 bp Feature: domain Description: groEL Location: 82913-84530 bp Feature: domain Description: groEL Location: 82 913-84530 bp Feature: gene Location: 85489-85644 bp Feature: gene Location: 85661-87322 bp Feature: domain Description: RVT_N Location: 85712-85952 bp Feature: domain Description: RVT_N Location: 85712 -85952 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 86000-86645 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 86000-86645 bp Feature: domain Description: GIIM Note: maturase Location: 86696-86930 bp Feature: domain Description: GIIM Note: maturase Location: 86696-86930 bp Feature: domain Description: HNH Note: nucleases Location: 87176-87311 bp Feature: domain Description: HNH Note: nucleases Location: 87176-87311 bp Feature: gene Location: 87352-87693 bp Feature: gene Location: 88019-89041 bp Feature: domain Description: EFP_modif_epmB Location: 88067-89024 bp Feature: domain Description: EFP_modif_epmB Location: 88067-8902 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT groEL (PRK12852), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844), EFP_modif_epmB (TIGR03821)

Seq: JABAIK010000064.1 Vibrio sp. SM6 Scaffold64, whole genome shotgun sequence (583 bp)
Overview 1 RT 1: 1-568 bp Neighborhood of RT #1 [1, 582] RVT-GII Feature: gene Location: 1-582 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 391-568 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 91-568 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII