myRT

myRT report for GCA_012642165.1_ASM1264216v1

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Seq: QYCA01000002.1 Streptococcus mutans strain UAB-19 NODE_2_length_628496_cov_35.8096, whole genome shotgun sequence (628496 bp)
Overview 1 RT 1: 698-4490 bp Neighborhood of RT #1 [698, 4490] Bacteriocin_IIc RVT-GII GIIM HTH_MARR Feature: gene Location: 698-865 bp Feature: gene Location: 894-1175 bp Feature: domain Description: Bacteriocin_IIc Location: 912-1113 bp Feature: domain Description: Bacteriocin_IIc Location: 91 2-1 1 1 3 bp Feature: gene Location: 2005-3258 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2209-2824 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2209-2824 bp Feature: domain Description: GIIM Note: maturase Location: 2878-3109 bp Feature: domain Description: GIIM Note: maturase Location: 2878-31 09 bp Feature: gene Location: 3593-4063 bp Feature: domain Description: HTH_MARR Location: 3728-4010 bp Feature: domain Description: HTH_MARR Location: 3728-401 0 bp Feature: gene Location: 4110-4490 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), HTH_MARR (smart00347), Bacteriocin_IIc (pfam10439)

Seq: QYCA01000005.1 Streptococcus mutans strain UAB-19 NODE_5_length_171519_cov_41.7347, whole genome shotgun sequence (171519 bp)
Overview 1 RT 1: 133959-139160 bp Neighborhood of RT #1 [133959, 139165] gatA gatB RVT-GII GIIM OmpR Feature: gene Location: 133959-135425 bp Feature: domain Description: gatA Location: 134004-135372 bp Feature: domain Description: gatA Location: 134004-135372 bp Feature: gene Location: 135425-136864 bp Feature: domain Description: gatB Location: 135428-136847 bp Feature: domain Description: gatB Location: 13542 8-136847 bp Feature: gene Location: 137589-137795 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 137592-137781 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 137592 -137781 bp Feature: gene Location: 138129-138362 bp Feature: domain Description: GIIM Note: maturase Location: 138135-138225 bp Feature: domain Description: GIIM Note: maturase Location: 138135-1382 2 5 bp Feature: gene Location: 138467-139165 bp Feature: domain Description: OmpR Location: 138497-139160 bp Feature: domain Description: OmpR Location: 138497-139160 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT gatA (TIGR00132), gatB (TIGR00133), RVT-GII, GIIM (pfam08388), OmpR (COG0745)