myRT

myRT report for GCA_012720005.1_ASM1272000v1

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Seq: JAAXZH010000029.1 Psychrobacter sp. FME2 isolate AS01afH2WH_27 9542_AS01, whole genome shotgun sequence (58977 bp)
Overview 1 RT 1: 36-8768 bp Neighborhood of RT #1 [36, 8770] int RVT-GII Intron_maturas2 HNHc PBP2_BvgS_HisK_like PAS_8 PRK09776 PAS PRK10060 PRK05658 Feature: gene Location: 36-596 bp Feature: domain Description: int Location: 51-471 bp Feature: domain Description: int Location: 51 -471 bp Feature: gene Location: 881-2731 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1148-1967 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 48-1 967 bp Feature: domain Description: Intron_maturas2 Location: 2060-2372 bp Feature: domain Description: Intron_maturas2 Location: 2060-2372 bp Feature: domain Description: HNHc Note: nucleases Location: 2504-2657 bp Feature: domain Description: HNHc Note: nucleases Location: 2504-2657 bp Feature: gene Location: 3426-6797 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 3531-4188 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 3531 -41 88 bp Feature: domain Description: PAS_8 Location: 4362-4488 bp Feature: domain Description: PAS_8 Location: 4362-4488 bp Feature: domain Description: PRK09776 Location: 4497-4734 bp Feature: domain Description: PRK09776 Location: 4497-4734 bp Feature: domain Description: PAS Location: 4785-5067 bp Feature: domain Description: PAS Location: 4785-5067 bp Feature: domain Description: PRK10060 Location: 5127-6738 bp Feature: domain Description: PRK1 0060 Location: 51 27-6738 bp Feature: gene Location: 6920-8770 bp Feature: domain Description: PRK05658 Location: 6932-8768 bp Feature: domain Description: PRK05658 Location: 6932-8768 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PBP2_BvgS_HisK_like (cd01007), PAS_8 (pfam13188), PRK09776 (putative diguanylate cyclase; Provisional), PAS (smart00091), PRK10060 (cyclic di-GMP phosphodiesterase), PRK05658 (RNA polymerase sigma factor RpoD; Validated), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)