myRT

myRT report for GCA_012727755.1_ASM1272775v1

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Seq: JAAYGK010000052.1 Alcaligenaceae bacterium isolate AS09scLD_210 135950_AS09, whole genome shotgun sequence (48022 bp)
Overview 1 RT 1: 5970-10828 bp Neighborhood of RT #1 [5970, 11277] COG5301 COG5301 RVT-DGRs Avd_like pfam03781 Feature: gene Location: 5970-6260 bp Feature: gene Location: 6271-7836 bp Feature: domain Description: COG5301 Location: 6280-6739 bp Feature: domain Description: COG5301 Location: 6280-6739 bp Feature: domain Description: COG5301 Location: 7207-7513 bp Feature: domain Description: COG5301 Location: 7207-751 3 bp Feature: gene Location: 8042-9127 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 8255-8882 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 8255-8882 bp Feature: gene Location: 9402-9794 bp Feature: domain Description: Avd_like Location: 9441-9741 bp Feature: domain Description: Avd_like Location: 9441 -9741 bp Feature: gene Location: 9841-11277 bp Feature: domain Description: pfam03781 Location: 10510-10828 bp Feature: domain Description: pfam03781 Location: 1 051 0-1 0828 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG5301 (Phage-related tail fibre protein ), RVT-DGRs, Avd_like (cd16376), pfam03781 (FGE-sulfatase;Sulfatase-modifying factor enzyme 1)

Seq: JAAYGK010000031.1 Alcaligenaceae bacterium isolate AS09scLD_210 80723_AS09, whole genome shotgun sequence (9987 bp)
Overview 1 RT 1: 1418-5593 bp Neighborhood of RT #1 [1418, 5593] UppP IMPase RVT_N RVT-GII GIIM HNHc Feature: gene Location: 1418-2272 bp Feature: domain Description: UppP Location: 1430-2255 bp Feature: domain Description: UppP Location: 1430-2 2 55 bp Feature: gene Location: 2289-3083 bp Feature: domain Description: IMPase Location: 2301-3039 bp Feature: domain Description: IMPase Location: 2 301-3039 bp Feature: gene Location: 3213-4922 bp Feature: RT Description: RVT_N Location: 3285-3528 bp Feature: RT Description: RVT_N Location: 32 85-352 8 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3576-4224 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3576-42 2 4 bp Feature: domain Description: GIIM Note: maturase Location: 4278-4509 bp Feature: domain Description: GIIM Note: maturase Location: 42 78-4509 bp Feature: domain Description: HNHc Note: nucleases Location: 4725-4890 bp Feature: domain Description: HNHc Note: nucleases Location: 472 5-4890 bp Feature: gene Location: 5020-5172 bp Feature: gene Location: 5336-5593 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT UppP (COG1968), IMPase (cd01639), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507)