myRT

myRT report for GCA_012728855.1_ASM1272885v1

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Seq: JAAYEH010000284.1 Rhodopirellula sp. isolate AS06rmzACSIP_8 320083_AS06, whole genome shotgun sequence (2844 bp)
Overview 1 RT 1: 912-2646 bp Neighborhood of RT #1 [912, 2843] RVT-DGRs Feature: gene Location: 912-1589 bp Feature: gene Location: 1586-1969 bp Feature: gene Location: 2463-2843 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2466-2646 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2466-2646 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs

Seq: JAAYEH010000347.1 Rhodopirellula sp. isolate AS06rmzACSIP_8 387685_AS06, whole genome shotgun sequence (14545 bp)
Overview 1 RT 1: 924-7275 bp Neighborhood of RT #1 [924, 7275] recD_rel DUF4886 Aes RVT-Retrons SPFH_eoslipins_u2 Feature: gene Location: 924-3086 bp Feature: domain Description: recD_rel Location: 939-3072 bp Feature: domain Description: recD_rel Location: 939-3072 bp Feature: gene Location: 3407-5161 bp Feature: domain Description: DUF4886 Location: 3659-4163 bp Feature: domain Description: DUF4886 Location: 3659-4163 bp Feature: domain Description: Aes Location: 4361-5051 bp Feature: domain Description: Aes Location: 4361-5051 bp Feature: gene Location: 5328-6200 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 5484-6012 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 5484-6012 bp Feature: gene Location: 6197-6916 bp Feature: domain Description: SPFH_eoslipins_u2 Location: 6215-6845 bp Feature: domain Description: SPFH_eoslipins_u2 Location: 62 15-6845 bp Feature: gene Location: 7090-7275 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT recD_rel (TIGR01448), DUF4886 (pfam16227), Aes (COG0657), RVT-Retrons, SPFH_eoslipins_u2 (cd13438)

Seq: JAAYEH010000536.1 Rhodopirellula sp. isolate AS06rmzACSIP_8 576318_AS06, whole genome shotgun sequence (1937 bp)
Overview 1 RT 1: 3-1933 bp Neighborhood of RT #1 [3, 1935] RVT-GII RVT-GII Feature: gene Location: 3-293 bp Feature: gene Location: 346-1260 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 376-880 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 76-880 bp Feature: gene Location: 1321-1935 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1840-1933 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1840-193 3 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: JAAYEH010000567.1 Rhodopirellula sp. isolate AS06rmzACSIP_8 595974_AS06, whole genome shotgun sequence (2282 bp)
Overview 1 RT 1: 2-2169 bp Neighborhood of RT #1 [2, 2279] RVT-UG4 ycf46 Feature: gene Location: 2-343 bp Feature: gene Location: 796-1278 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 802-1126 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 802-1126 bp Feature: gene Location: 1359-2279 bp Feature: domain Description: ycf46 Location: 1380-2169 bp Feature: domain Description: ycf4 6 Location: 1380-2169 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG4, ycf46 (CHL00195)

Seq: JAAYEH010000007.1 Rhodopirellula sp. isolate AS06rmzACSIP_8 5964_AS06, whole genome shotgun sequence (2603 bp)
Overview 1 RT 1: 2-2476 bp Neighborhood of RT #1 [2, 2577] RVT-GII PinE Zn_ribbon_recom HTH_17 Feature: gene Location: 2-136 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14-128 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14-128 bp Feature: gene Location: 193-525 bp Feature: gene Location: 529-2577 bp Feature: domain Description: PinE Location: 577-1225 bp Feature: domain Description: PinE Location: 5 77-1225 bp Feature: domain Description: Zn_ribbon_recom Location: 1510-1666 bp Feature: domain Description: Zn_ribbon_recom Location: 15 10-1666 bp Feature: domain Description: HTH_17 Location: 2389-2476 bp Feature: domain Description: HTH_17 Location: 2389-2476 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PinE (COG1961), Zn_ribbon_recom (pfam13408), HTH_17 (pfam12728)

Seq: JAAYEH010000578.1 Rhodopirellula sp. isolate AS06rmzACSIP_8 610567_AS06, whole genome shotgun sequence (17282 bp)
Overview 1 RT 1: 9024-13245 bp Neighborhood of RT #1 [9024, 13245] ParBc RVT-CRISPR-like Feature: gene Location: 9024-10184 bp Feature: domain Description: ParBc Location: 9129-9336 bp Feature: domain Description: ParBc Location: 9129-9336 bp Feature: gene Location: 10171-10395 bp Feature: gene Location: 10379-11671 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 10742-11270 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 10742-11270 bp Feature: gene Location: 11668-13023 bp Feature: gene Location: 13045-13245 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ParBc (pfam02195), RVT-CRISPR