myRT

myRT report for GCA_012728935.1_ASM1272893v1

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Seq: JAAYEE010000065.1 Syntrophorhabdus aromaticivorans isolate AS06rmzACSIP_7 101811_AS06, whole genome shotgun sequence (14718 bp)
Overview 1 RT 1: 85-2439 bp Neighborhood of RT #1 [85, 2483] RVT-UG28 Piwi_piwi-like_ProArk Feature: gene Location: 85-603 bp Feature: RT Description: RVT-UG28 Note: UG28 RT Location: 376-568 bp Feature: RT Description: RVT-UG28 Note: UG28 RT Location: 376-568 bp Feature: gene Location: 802-1014 bp Feature: gene Location: 1062-2483 bp Feature: domain Description: Piwi_piwi-like_ProArk Location: 1104-2439 bp Feature: domain Description: Piwi_piwi-like_ProArk Location: 1 1 04-2439 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG28, Piwi_piwi-like_ProArk (cd04659)

Seq: JAAYEE010000213.1 Syntrophorhabdus aromaticivorans isolate AS06rmzACSIP_7 392997_AS06, whole genome shotgun sequence (7770 bp)
Overview 1 RT 1: 2908-7770 bp Neighborhood of RT #1 [2908, 7769] TIGR03986 TIGR03986 CRISPR_Cas6 RVT-CRISPR Cas_Cas1 Cas2_I_II_III Feature: gene Location: 2908-4575 bp Feature: domain Description: TIGR03986 Location: 2926-3226 bp Feature: domain Description: TIGR03986 Location: 2 92 6-32 2 6 bp Feature: domain Description: TIGR03986 Location: 3469-4096 bp Feature: domain Description: TIGR03986 Location: 3469-4096 bp Feature: gene Location: 4584-5534 bp Feature: domain Description: CRISPR_Cas6 Location: 5151-5517 bp Feature: domain Description: CRISPR_Cas6 Location: 5151-5517 bp Feature: gene Location: 5527-7521 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 5731-6343 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 5731-6343 bp Feature: domain Description: Cas_Cas1 Location: 6814-7510 bp Feature: domain Description: Cas_Cas1 Location: 6814-7510 bp Feature: gene Location: 7644-7769 bp Feature: domain Description: Cas2_I_II_III Location: 7659-7770 bp Feature: domain Description: Cas2 _I_II_III Location: 7659-7770 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TIGR03986 (CRISPR-associated protein), CRISPR_Cas6 (pfam10040), RVT-CRISPR, Cas_Cas1 (pfam01867), Cas2_I_II_III (cl11442)

Seq: JAAYEE010000280.1 Syntrophorhabdus aromaticivorans isolate AS06rmzACSIP_7 552742_AS06, whole genome shotgun sequence (6889 bp)
Overview 1 RT 1: 4091-6179 bp Neighborhood of RT #1 [4091, 6757] PRK09276 RVT-UG28 Feature: gene Location: 4091-5272 bp Feature: domain Description: PRK09276 Location: 4094-5240 bp Feature: domain Description: PRK09276 Location: 4094-5240 bp Feature: gene Location: 5340-5501 bp Feature: gene Location: 5741-6757 bp Feature: RT Description: RVT-UG28 Note: UG28 RT Location: 5744-6179 bp Feature: RT Description: RVT-UG28 Note: UG28 RT Location: 5744-6179 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09276 (LL-diaminopimelate aminotransferase; Provisional), RVT-UG28