myRT

myRT report for GCA_012767855.1_ASM1276785v1

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Seq: BLRR01000040.1 Streptococcus canis FU149 DNA, ScFU149_contig40, whole genome shotgun sequence (32172 bp)
Overview 1 RT 1: 8166-32154 bp Neighborhood of RT #1 [8166, 32171] RVT_N RVT-GII GIIM N6_Mtase COG4646 KOG0390 isopep_sspB_C2 isopep_sspB_C2 AgI_II_C2 LPXTG_anchor HNHc RVT-GII strep_RK_lipo Adhesin_P1_N GbpC GbpC AgI_II_C2 isopep_sspB_C2 COG5340 Cas9 RVT-GII Peptidase_M23 Phage_lysozyme2 PRK08581 Feature: gene Location: 8166-8975 bp Feature: gene Location: 9109-9450 bp Feature: gene Location: 9547-10959 bp Feature: RT Description: RVT_N Location: 9784-10027 bp Feature: RT Description: RVT_N Location: 9784-1 0027 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10072-10720 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 0072-1 0720 bp Feature: domain Description: GIIM Note: maturase Location: 10777-10954 bp Feature: domain Description: GIIM Note: maturase Location: 1 0777-1 0954 bp Feature: gene Location: 11327-17338 bp Feature: domain Description: N6_Mtase Location: 13355-13943 bp Feature: domain Description: N6_Mtase Location: 1 3355-1 3943 bp Feature: domain Description: COG4646 Location: 14537-16841 bp Feature: domain Description: COG4646 Location: 1 4537-1 6841 bp Feature: domain Description: KOG0390 Location: 17108-17309 bp Feature: domain Description: KOG0390 Location: 1 71 08-1 7309 bp Feature: gene Location: 17389-17919 bp Feature: gene Location: 18116-19885 bp Feature: domain Description: isopep_sspB_C2 Location: 18170-18689 bp Feature: domain Description: isopep_sspB_C2 Location: 1 81 70-1 8689 bp Feature: domain Description: isopep_sspB_C2 Location: 18701-19220 bp Feature: domain Description: isopep_sspB_C2 Location: 1 8701 -1 9220 bp Feature: domain Description: AgI_II_C2 Location: 19238-19688 bp Feature: domain Description: AgI_II_C2 Location: 1 9238-1 9688 bp Feature: domain Description: LPXTG_anchor Location: 19787-19874 bp Feature: domain Description: LPXTG_anchor Location: 1 9787-1 9874 bp Feature: gene Location: 20010-20495 bp Feature: domain Description: HNHc Note: nucleases Location: 20250-20385 bp Feature: domain Description: HNHc Note: nucleases Location: 20250-20385 bp Feature: gene Location: 20691-21770 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20952-21648 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20952-21 648 bp Feature: gene Location: 22485-25646 bp Feature: domain Description: strep_RK_lipo Location: 22542-22647 bp Feature: domain Description: strep_RK_lipo Location: 22542-22647 bp Feature: domain Description: Adhesin_P1_N Location: 22797-22986 bp Feature: domain Description: Adhesin_P1 _N Location: 22797-22986 bp Feature: domain Description: GbpC Location: 23595-23787 bp Feature: domain Description: GbpC Location: 23595-23787 bp Feature: domain Description: GbpC Location: 23787-24375 bp Feature: domain Description: GbpC Location: 23787-24375 bp Feature: domain Description: AgI_II_C2 Location: 24678-25080 bp Feature: domain Description: AgI_II_C2 Location: 24678-25080 bp Feature: domain Description: isopep_sspB_C2 Location: 25134-25623 bp Feature: domain Description: isopep_sspB_C2 Location: 251 34-25623 bp Feature: gene Location: 25910-26041 bp Feature: gene Location: 26887-27510 bp Feature: domain Description: COG5340 Location: 26953-27421 bp Feature: domain Description: COG5340 Location: 26953-27421 bp Feature: gene Location: 27864-28619 bp Feature: domain Description: Cas9 Location: 28227-28464 bp Feature: domain Description: Cas9 Location: 28227-28464 bp Feature: gene Location: 28623-29777 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 28950-29685 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 28950-29685 bp Feature: gene Location: 30486-32171 bp Feature: domain Description: Peptidase_M23 Location: 30921-31134 bp Feature: domain Description: Peptidase_M23 Location: 30921 -31 1 34 bp Feature: domain Description: Phage_lysozyme2 Location: 31275-31785 bp Feature: domain Description: Phage_lysozyme2 Location: 31 275-31 785 bp Feature: domain Description: PRK08581 Location: 31905-32154 bp Feature: domain Description: PRK08581 Location: 31 905-321 54 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT N6_Mtase (pfam02384), COG4646 (Adenine-specific DNA methylase, N12 class ), KOG0390 (KOG0390, DNA repair protein, SNF2 family ), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), isopep_sspB_C2 (TIGR04228), AgI_II_C2 (pfam17998), LPXTG_anchor (TIGR01167), HNHc (smart00507)
strep_RK_lipo (TIGR03726), Adhesin_P1_N (pfam18652), GbpC (pfam08363), COG5340 (Transcriptional regulator, predicted component of viral defense system ), Cas9 (COG3513), Peptidase_M23 (pfam01551), Phage_lysozyme2 (pfam18013), PRK08581 (amidase domain-containing protein)

Seq: BLRR01000051.1 Streptococcus canis FU149 DNA, ScFU149_contig51, whole genome shotgun sequence (2282 bp)
Overview 1 RT 1: 245-2160 bp Neighborhood of RT #1 [245, 2195] RVT_N RVT-GII GIIM HNH Feature: gene Location: 245-430 bp Feature: gene Location: 498-2195 bp Feature: RT Description: RVT_N Location: 594-834 bp Feature: RT Description: RVT_N Location: 594-834 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 882-1542 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 882 -1542 bp Feature: domain Description: GIIM Note: maturase Location: 1611-1830 bp Feature: domain Description: GIIM Note: maturase Location: 1611-1830 bp Feature: domain Description: HNH Note: nucleases Location: 2043-2160 bp Feature: domain Description: HNH Note: nucleases Location: 2 043-2 160 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844)