myRT

myRT report for GCA_012798655.1_ASM1279865v1

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Seq: JAAZMV010000782.1 Clostridiaceae bacterium isolate AS24abBPME_53 13299_AS24, whole genome shotgun sequence (6622 bp)
Overview 1 RT 1: 3-5744 bp Neighborhood of RT #1 [3, 5992] HTH_Tnp_1 HTH_Tnp_1 RVT-UG14 dnaG DUF3991 Toprim_2 VirD4 Feature: gene Location: 3-131 bp Feature: gene Location: 473-967 bp Feature: domain Description: HTH_Tnp_1 Location: 482-629 bp Feature: domain Description: HTH_Tnp_1 Location: 482-629 bp Feature: domain Description: HTH_Tnp_1 Location: 650-875 bp Feature: domain Description: HTH_Tnp_1 Location: 650-875 bp Feature: gene Location: 1176-2465 bp Feature: RT Description: RVT-UG14 Note: UG14 RT Location: 1284-1638 bp Feature: RT Description: RVT-UG1 4 Note: UG1 4 RT Location: 1 284-1 638 bp Feature: gene Location: 2706-4118 bp Feature: domain Description: dnaG Location: 2883-3009 bp Feature: domain Description: dnaG Location: 2883-3009 bp Feature: domain Description: DUF3991 Location: 3066-3315 bp Feature: domain Description: DUF3991 Location: 3066-331 5 bp Feature: domain Description: Toprim_2 Location: 3330-3600 bp Feature: domain Description: Toprim_2 Location: 3330-3600 bp Feature: gene Location: 4178-5992 bp Feature: domain Description: VirD4 Location: 4238-5744 bp Feature: domain Description: VirD4 Location: 4238-5744 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_Tnp_1 (pfam01527), RVT-UG14, dnaG (TIGR01391), DUF3991 (pfam13154), Toprim_2 (pfam13155), VirD4 (COG3505)

Seq: JAAZMV010000469.1 Clostridiaceae bacterium isolate AS24abBPME_53 25515_AS24, whole genome shotgun sequence (25044 bp)
Overview 1 RT 1: 50-4761 bp Neighborhood of RT #1 [50, 4778] Cas2_I_II_III cas_cas6 RVT-CRISPR Cas1_I-II-III Cmr6_III-B Cas_Cmr5 Feature: gene Location: 50-325 bp Feature: domain Description: Cas2_I_II_III Location: 59-269 bp Feature: domain Description: Cas2 _I_II_III Location: 59-2 69 bp Feature: gene Location: 330-3383 bp Feature: domain Description: cas_cas6 Location: 606-1200 bp Feature: domain Description: cas_cas6 Location: 606-12 00 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 1332-1947 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 1332 -1947 bp Feature: domain Description: Cas1_I-II-III Location: 2382-3342 bp Feature: domain Description: Cas1_I-II-III Location: 2 382 -3342 bp Feature: gene Location: 3410-4390 bp Feature: domain Description: Cmr6_III-B Location: 3539-4388 bp Feature: domain Description: Cmr6_III-B Location: 3539-4388 bp Feature: gene Location: 4392-4778 bp Feature: domain Description: Cas_Cmr5 Location: 4455-4761 bp Feature: domain Description: Cas_Cmr5 Location: 4455-4761 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Cas2_I_II_III (cl11442), cas_cas6 (TIGR01877), RVT-CRISPR, Cas1_I-II-III (cl00656), Cmr6_III-B (cd09661), Cas_Cmr5 (pfam09701)

Seq: JAAZMV010000641.1 Clostridiaceae bacterium isolate AS24abBPME_53 49382_AS24, whole genome shotgun sequence (2286 bp)
Overview 1 RT 1: 600-1852 bp Neighborhood of RT #1 [600, 2022] RVT-Retrons Feature: gene Location: 600-839 bp Feature: gene Location: 1147-2022 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1324-1852 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 13 24-1852 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons