myRT

myRT report for GCA_012839675.1_ASM1283967v1

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Seq: DUMV01000006.1 TPA_asm: Rhodocyclaceae bacterium isolate AS04akNAM_97 11476_AS04, whole genome shotgun sequence (131410 bp)
Overview 1 RT 1: 113677-117682 bp Neighborhood of RT #1 [113677, 117687] RVT-DGRs PHA00652 PHA00653 Feature: gene Location: 113677-114420 bp Feature: gene Location: 114561-114971 bp Feature: gene Location: 114968-115939 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 115181-115763 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1 1 51 81 -1 1 5763 bp Feature: gene Location: 116209-116580 bp Feature: domain Description: PHA00652 Location: 116254-116569 bp Feature: domain Description: PHA00652 Location: 1 1 6254-1 1 6569 bp Feature: gene Location: 116605-117687 bp Feature: domain Description: PHA00653 Location: 116680-117682 bp Feature: domain Description: PHA00653 Location: 1 1 6680-1 1 7682 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, PHA00652 (hypothetical protein), PHA00653 (mtd;major tropism determinant)

Seq: DUMV01000021.1 TPA_asm: Rhodocyclaceae bacterium isolate AS04akNAM_97 41654_AS04, whole genome shotgun sequence (99549 bp)
Overview 1 RT 1: 10651-16360 bp Neighborhood of RT #1 [10651, 16365] COG4255 PRK11070 RVT-GII GIIM NADP_ADH Feature: gene Location: 10651-11691 bp Feature: domain Description: COG4255 Location: 10876-11635 bp Feature: domain Description: COG42 55 Location: 10876-11635 bp Feature: gene Location: 11688-13382 bp Feature: domain Description: PRK11070 Location: 11727-13374 bp Feature: domain Description: PRK11070 Location: 1172 7-13374 bp Feature: gene Location: 13461-14828 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13794-14409 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13794-14409 bp Feature: domain Description: GIIM Note: maturase Location: 14466-14682 bp Feature: domain Description: GIIM Note: maturase Location: 14466-14682 bp Feature: gene Location: 15025-15267 bp Feature: gene Location: 15271-16365 bp Feature: domain Description: NADP_ADH Location: 15283-16360 bp Feature: domain Description: NADP_ADH Location: 152 83-16360 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG4255 (Uncharacterized protein ), PRK11070 (single-stranded-DNA-specific exonuclease RecJ), RVT-GII, GIIM (pfam08388), NADP_ADH (cd08285)

Seq: DUMV01000024.1 TPA_asm: Rhodocyclaceae bacterium isolate AS04akNAM_97 44848_AS04, whole genome shotgun sequence (118525 bp)
Overview 1 RT 1: 34752-38951 bp Neighborhood of RT #1 [34752, 38956] RVT-DGRs PHA00652 PHA02515 PHA00653 Feature: gene Location: 34752-34940 bp Feature: gene Location: 34985-35398 bp Feature: gene Location: 35395-36639 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 35881-36463 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 3 5881-3 6463 bp Feature: gene Location: 36644-37015 bp Feature: domain Description: PHA00652 Location: 36689-37010 bp Feature: domain Description: PHA00652 Location: 3 6689-3 7010 bp Feature: gene Location: 37046-38956 bp Feature: domain Description: PHA02515 Location: 37049-37640 bp Feature: domain Description: PHA02515 Location: 3 7049-3 7640 bp Feature: domain Description: PHA00653 Location: 37820-38951 bp Feature: domain Description: PHA00653 Location: 3 7820-3 8951 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, PHA00652 (hypothetical protein), PHA02515 (hypothetical protein; Provisional), PHA00653 (mtd;major tropism determinant)