myRT

myRT report for GCA_012840135.1_ASM1284013v1

Download annotations/find similar RTs

Seq: DUMA01000017.1 TPA_asm: Thermoanaerobacterales bacterium isolate AS04akNAM_31 23273_AS04, whole genome shotgun sequence (158074 bp)
Overview 1 RT 1: 99-3157 bp Neighborhood of RT #1 [99, 3157] RVT-GII GIIM RVT-GII GIIM RVT-GII Feature: gene Location: 99-668 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 129-315 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 29-31 5 bp Feature: domain Description: GIIM Note: maturase Location: 396-597 bp Feature: domain Description: GIIM Note: maturase Location: 396-597 bp Feature: gene Location: 721-1386 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 733-1000 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 733-1 000 bp Feature: domain Description: GIIM Note: maturase Location: 1081-1312 bp Feature: domain Description: GIIM Note: maturase Location: 1 081 -1 31 2 bp Feature: gene Location: 1374-1895 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1578-1893 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 578-1 893 bp Feature: gene Location: 2763-2912 bp Feature: gene Location: 2978-3157 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: DUMA01000018.1 TPA_asm: Thermoanaerobacterales bacterium isolate AS04akNAM_31 25394_AS04, whole genome shotgun sequence (184328 bp)
Overview 1 RT 1: 131587-138631 bp Neighborhood of RT #1 [131587, 138780] PinE Zn_ribbon_recom DUF4065 MidA RVT-UG25 KOG0567 DUF1848 fliH Feature: gene Location: 131587-133257 bp Feature: domain Description: PinE Location: 131593-132172 bp Feature: domain Description: PinE Location: 131593-132 172 bp Feature: domain Description: Zn_ribbon_recom Location: 132529-132709 bp Feature: domain Description: Zn_ribbon_recom Location: 132 52 9-132 709 bp Feature: gene Location: 133263-133709 bp Feature: domain Description: DUF4065 Location: 133296-133548 bp Feature: domain Description: DUF4065 Location: 1332 96-133548 bp Feature: gene Location: 133958-136609 bp Feature: domain Description: MidA Location: 134078-134300 bp Feature: domain Description: MidA Location: 134078-134300 bp Feature: RT Description: RVT-UG25 Note: UG25 RT Location: 135137-135521 bp Feature: RT Description: RVT-UG2 5 Note: UG2 5 RT Location: 135137-13552 1 bp Feature: domain Description: KOG0567 Location: 136127-136319 bp Feature: domain Description: KOG0567 Location: 13612 7-136319 bp Feature: gene Location: 136633-137574 bp Feature: domain Description: DUF1848 Location: 136639-137434 bp Feature: domain Description: DUF1848 Location: 136639-137434 bp Feature: gene Location: 137746-138780 bp Feature: domain Description: fliH Location: 138439-138631 bp Feature: domain Description: fliH Location: 138439-138631 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PinE (COG1961), Zn_ribbon_recom (pfam13408), DUF4065 (pfam13274), MidA (COG1565), RVT-UG25, KOG0567 (KOG0567, HEAT repeat-containing protein ), DUF1848 (pfam08902), fliH (PRK13386)