myRT

myRT report for GCA_012841535.1_ASM1284153v1

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Seq: DUUN01000201.1 TPA_asm: Gallicola sp. isolate AS08sgBPME_230 127096_AS08, whole genome shotgun sequence (11355 bp)
Overview 1 RT 1: 201-3710 bp Neighborhood of RT #1 [201, 3710] RVT-Retrons ASCH_ASC-1_like Feature: gene Location: 201-473 bp Feature: gene Location: 658-1899 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 943-1522 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 943-1 522 bp Feature: gene Location: 2452-2850 bp Feature: domain Description: ASCH_ASC-1_like Location: 2455-2773 bp Feature: domain Description: ASCH_ASC-1 _like Location: 2455-2773 bp Feature: gene Location: 2937-3710 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, ASCH_ASC-1_like (cd06554)

Seq: DUUN01000590.1 TPA_asm: Gallicola sp. isolate AS08sgBPME_230 184408_AS08, whole genome shotgun sequence (3097 bp)
Overview 1 RT 1: 2-2429 bp Neighborhood of RT #1 [2, 3055] hsdR DUF3387 RVT-AbiP2 Feature: gene Location: 2-1522 bp Feature: domain Description: hsdR Location: 17-545 bp Feature: domain Description: hsdR Location: 17-545 bp Feature: domain Description: DUF3387 Location: 545-1508 bp Feature: domain Description: DUF3387 Location: 545-1508 bp Feature: gene Location: 1553-3055 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 1979-2429 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 1979-2 42 9 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT hsdR (TIGR00348), DUF3387 (pfam11867), RVT-AbiP2

Seq: DUUN01000387.1 TPA_asm: Gallicola sp. isolate AS08sgBPME_230 8745_AS08, whole genome shotgun sequence (3448 bp)
Overview 1 RT 1: 252-3433 bp Neighborhood of RT #1 [252, 3447] RVT-AbiA HEPN_AbiA_CTD dcm DNA_methylase Feature: gene Location: 252-2087 bp Feature: RT Description: RVT-AbiA Note: AbiA RT Location: 621-1104 bp Feature: RT Description: RVT-AbiA Note: AbiA RT Location: 621-1104 bp Feature: domain Description: HEPN_AbiA_CTD Location: 1719-2076 bp Feature: domain Description: HEPN_AbiA_CTD Location: 1719-2076 bp Feature: gene Location: 2136-3122 bp Feature: domain Description: dcm Location: 2175-3084 bp Feature: domain Description: dcm Location: 2175-3 084 bp Feature: gene Location: 3124-3447 bp Feature: domain Description: DNA_methylase Location: 3166-3433 bp Feature: domain Description: DNA_methylase Location: 3 166-3 43 3 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-AbiA, HEPN_AbiA_CTD (pfam18732), dcm (TIGR00675), DNA_methylase (pfam00145)