myRT

myRT report for GCA_012841565.1_ASM1284156v1

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Seq: DUUM01000191.1 TPA_asm: Epulopiscium sp. isolate AS08sgBPME_219 150214_AS08, whole genome shotgun sequence (3661 bp)
Overview 1 RT 1: 702-3656 bp Neighborhood of RT #1 [702, 3658] PLN02240 RVT-GII Feature: gene Location: 702-1694 bp Feature: domain Description: PLN02240 Location: 708-1689 bp Feature: domain Description: PLN02240 Location: 708-1 689 bp Feature: gene Location: 2367-2528 bp Feature: gene Location: 2906-3658 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3137-3656 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31 37-3656 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PLN02240 (UDP-glucose 4-epimerase), RVT-GII

Seq: DUUM01000020.1 TPA_asm: Epulopiscium sp. isolate AS08sgBPME_219 15590_AS08, whole genome shotgun sequence (11192 bp)
Overview 1 RT 1: 5411-10555 bp Neighborhood of RT #1 [5411, 10555] Acylphosphatase RVT-UG24 Feature: gene Location: 5411-5794 bp Feature: domain Description: Acylphosphatase Location: 5519-5783 bp Feature: domain Description: Acylphosphatase Location: 5519-5783 bp Feature: gene Location: 5826-6335 bp Feature: gene Location: 6374-9778 bp Feature: RT Description: RVT-UG24 Note: UG24 RT Location: 6896-7358 bp Feature: RT Description: RVT-UG2 4 Note: UG2 4 RT Location: 6896-7358 bp Feature: gene Location: 9771-10313 bp Feature: gene Location: 10367-10555 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Acylphosphatase (pfam00708), RVT-UG24

Seq: DUUM01000384.1 TPA_asm: Epulopiscium sp. isolate AS08sgBPME_219 281429_AS08, whole genome shotgun sequence (2500 bp)
Overview 1 RT 1: 156-2097 bp Neighborhood of RT #1 [156, 2240] RVT-GII GIIM Cu_amine_oxidN1 Feature: gene Location: 156-1502 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 462-1131 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 462-113 1 bp Feature: domain Description: GIIM Note: maturase Location: 1212-1416 bp Feature: domain Description: GIIM Note: maturase Location: 1212-1416 bp Feature: gene Location: 1641-2240 bp Feature: domain Description: Cu_amine_oxidN1 Location: 1848-2097 bp Feature: domain Description: Cu_amine_oxidN1 Location: 1848-2097 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), Cu_amine_oxidN1 (pfam07833)

Seq: DUUM01000058.1 TPA_asm: Epulopiscium sp. isolate AS08sgBPME_219 49657_AS08, whole genome shotgun sequence (2681 bp)
Overview 1 RT 1: 212-2679 bp Neighborhood of RT #1 [212, 2679] RVT-GII group_II_RT_mat Feature: gene Location: 212-412 bp Feature: gene Location: 628-1542 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 883-1498 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 883-14 98 bp Feature: gene Location: 1621-1968 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 1630-1843 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 1630-184 3 bp Feature: gene Location: 2524-2679 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, group_II_RT_mat (TIGR04416)