myRT

myRT report for GCA_012842355.1_ASM1284235v1

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Seq: DUSZ01000149.1 TPA_asm: Alicyclobacillus sp. isolate AS04akNAM_9 16571_AS04, whole genome shotgun sequence (2791 bp)
Overview 1 RT 1: 76-2596 bp Neighborhood of RT #1 [76, 2596] RVT-GII HNHc RVT-GII Feature: gene Location: 76-1230 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 79-385 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 79-385 bp Feature: domain Description: HNHc Note: nucleases Location: 982-1150 bp Feature: domain Description: HNHc Note: nucleases Location: 982-1 1 50 bp Feature: gene Location: 1237-1941 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1552-1939 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 552-1 939 bp Feature: gene Location: 2182-2394 bp Feature: gene Location: 2435-2596 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507)

Seq: DUSZ01000267.1 TPA_asm: Alicyclobacillus sp. isolate AS04akNAM_9 29342_AS04, whole genome shotgun sequence (7210 bp)
Overview 1 RT 1: 71-2302 bp Neighborhood of RT #1 [71, 2316] RVT-GII GIIM RpmA Feature: gene Location: 71-1330 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 263-881 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 63-881 bp Feature: domain Description: GIIM Note: maturase Location: 938-1163 bp Feature: domain Description: GIIM Note: maturase Location: 938-1163 bp Feature: gene Location: 1569-1877 bp Feature: gene Location: 2020-2316 bp Feature: domain Description: RpmA Location: 2047-2302 bp Feature: domain Description: RpmA Location: 2 047-2 302 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), RpmA (COG0211)

Seq: DUSZ01000005.1 TPA_asm: Alicyclobacillus sp. isolate AS04akNAM_9 459_AS04, whole genome shotgun sequence (4459 bp)
Overview 1 RT 1: 75-2128 bp Neighborhood of RT #1 [75, 2128] RVT-GII Feature: gene Location: 75-1472 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 390-1092 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 90-1092 bp Feature: gene Location: 1558-1926 bp Feature: gene Location: 1967-2128 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: DUSZ01000475.1 TPA_asm: Alicyclobacillus sp. isolate AS04akNAM_9 49497_AS04, whole genome shotgun sequence (4337 bp)
Overview 1 RT 1: 129-3397 bp Neighborhood of RT #1 [129, 3397] BID_2 BID_2 RVT-GII M48B_Htpx_like Feature: gene Location: 129-1025 bp Feature: domain Description: BID_2 Location: 468-615 bp Feature: domain Description: BID_2 Location: 4 68-615 bp Feature: domain Description: BID_2 Location: 741-957 bp Feature: domain Description: BID_2 Location: 74 1-957 bp Feature: gene Location: 1399-1530 bp Feature: gene Location: 1634-1846 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1637-1802 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1637-1802 bp Feature: gene Location: 2072-3007 bp Feature: domain Description: M48B_Htpx_like Location: 2261-2984 bp Feature: domain Description: M4 8B_Htpx_like Location: 2261-2984 bp Feature: gene Location: 3026-3397 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT BID_2 (smart00635), RVT-GII, M48B_Htpx_like (cd07340)

Seq: DUSZ01000564.1 TPA_asm: Alicyclobacillus sp. isolate AS04akNAM_9 56684_AS04, whole genome shotgun sequence (16327 bp)
Overview 1 RT 1: 10561-14688 bp Neighborhood of RT #1 [10561, 14688] EAL RVT-GII GIIM Feature: gene Location: 10561-11247 bp Feature: domain Description: EAL Location: 10579-11212 bp Feature: domain Description: EAL Location: 105 79-11212 bp Feature: gene Location: 11300-11626 bp Feature: gene Location: 11749-13614 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12064-12769 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12064-12769 bp Feature: domain Description: GIIM Note: maturase Location: 12856-12979 bp Feature: domain Description: GIIM Note: maturase Location: 1285 6-12979 bp Feature: gene Location: 13854-14297 bp Feature: gene Location: 14446-14688 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT EAL (smart00052), RVT-GII, GIIM (pfam08388)

Seq: DUSZ01000681.1 TPA_asm: Alicyclobacillus sp. isolate AS04akNAM_9 67516_AS04, whole genome shotgun sequence (3314 bp)
Overview 1 RT 1: 1150-3077 bp Neighborhood of RT #1 [1150, 3244] SPW RVT-GII GIIM Feature: gene Location: 1150-1332 bp Feature: domain Description: SPW Location: 1174-1312 bp Feature: domain Description: SPW Location: 1174-1312 bp Feature: gene Location: 1422-1652 bp Feature: gene Location: 1832-3244 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2177-2795 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2177-2795 bp Feature: domain Description: GIIM Note: maturase Location: 2852-3077 bp Feature: domain Description: GIIM Note: maturase Location: 2852-3077 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SPW (pfam03779), RVT-GII, GIIM (pfam08388)