myRT

myRT report for GCA_012844105.1_ASM1284410v1

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Seq: JABAGK010000002.1 Bacteroides fragilis strain COR2-248-WT-1 Contig_2, whole genome shotgun sequence (500346 bp)
Overview 1 RT 1: 388293-397257 bp Neighborhood of RT #1 [388293, 397259] RNase_Z rpsA RVT-Retrons GlnA3 Feature: gene Location: 388293-389207 bp Feature: domain Description: RNase_Z Location: 388308-389199 bp Feature: domain Description: RNase_Z Location: 388308-3891 99 bp Feature: gene Location: 389357-391150 bp Feature: domain Description: rpsA Location: 389435-391043 bp Feature: domain Description: rpsA Location: 389435-391 043 bp Feature: gene Location: 391292-392404 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 391607-392156 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 391 607-3921 56 bp Feature: gene Location: 392611-394830 bp Feature: gene Location: 395070-397259 bp Feature: domain Description: GlnA3 Location: 395145-397257 bp Feature: domain Description: GlnA3 Location: 3951 45-397257 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RNase_Z (TIGR02651), rpsA (TIGR00717), RVT-Retrons, GlnA3 (COG3968)

Seq: JABAGK010000027.1 Bacteroides fragilis strain COR2-248-WT-1 Contig_27, whole genome shotgun sequence (69760 bp)
Overview 1 RT 1: 31464-37533 bp Neighborhood of RT #1 [31464, 37533] Cas2_I_II_III RVT-CRISPR Cas1_I-II-III DUF3692 Cmr6_III-B Feature: gene Location: 31464-31706 bp Feature: gene Location: 32658-32948 bp Feature: domain Description: Cas2_I_II_III Location: 32685-32895 bp Feature: domain Description: Cas2 _I_II_III Location: 32 685-32 895 bp Feature: gene Location: 32942-35212 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 33149-33755 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 33149-33755 bp Feature: domain Description: Cas1_I-II-III Location: 34214-35171 bp Feature: domain Description: Cas1_I-II-III Location: 342 14-35171 bp Feature: gene Location: 35232-36119 bp Feature: domain Description: DUF3692 Location: 35241-35376 bp Feature: domain Description: DUF3692 Location: 352 41-35376 bp Feature: domain Description: Cmr6_III-B Location: 36000-36108 bp Feature: domain Description: Cmr6_III-B Location: 36000-36108 bp Feature: gene Location: 36124-37533 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Cas2_I_II_III (cl11442), RVT-CRISPR, Cas1_I-II-III (cl00656), DUF3692 (pfam12469), Cmr6_III-B (cd09661)