myRT

myRT report for GCA_012863495.1_ASM1286349v1

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Seq: JAAVJL010000001.1 Pseudanabaena yagii GIHE-NHR1 1013Pa_1_1, whole genome shotgun sequence (3694966 bp)
Overview 1 RT 1: 3131589-3135041 bp Neighborhood of RT #1 [3131589, 3135085] PIN_VapC4-5_FitB-like RVT-Retrons RelE Feature: gene Location: 3131589-3131813 bp Feature: domain Description: PIN_VapC4-5_FitB-like Location: 3131601-3131757 bp Feature: domain Description: PIN_VapC4-5_FitB-like Location: 31 31 601 -31 31 757 bp Feature: gene Location: 3131820-3132032 bp Feature: gene Location: 3132422-3134227 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3132587-3133187 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 31 32587-31 331 87 bp Feature: gene Location: 3134280-3134447 bp Feature: gene Location: 3134699-3135085 bp Feature: domain Description: RelE Location: 3134762-3135041 bp Feature: domain Description: RelE Location: 31 34762-31 35041 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PIN_VapC4-5_FitB-like (cd18754), RVT-Retrons, RelE (pfam06296)

Seq: JAAVJL010000002.1 Pseudanabaena yagii GIHE-NHR1 1013Pa_2_1, whole genome shotgun sequence (724272 bp)
Overview 1 RT 1: 228659-233180 bp Neighborhood of RT #1 [228659, 233269] DDE_Tnp_1 UvrD UvrD RVT-UG19 DUF2281 Feature: gene Location: 228659-229840 bp Feature: domain Description: DDE_Tnp_1 Location: 229121-229574 bp Feature: domain Description: DDE_Tnp_1 Location: 2 2 912 1-2 2 9574 bp Feature: gene Location: 229803-230963 bp Feature: domain Description: UvrD Location: 230034-230160 bp Feature: domain Description: UvrD Location: 2 30034-2 30160 bp Feature: domain Description: UvrD Location: 230265-230529 bp Feature: domain Description: UvrD Location: 2 302 65-2 3052 9 bp Feature: gene Location: 230974-232698 bp Feature: RT Description: RVT-UG19 Note: UG19 RT Location: 231364-231856 bp Feature: RT Description: RVT-UG19 Note: UG19 RT Location: 2 31364-2 31856 bp Feature: gene Location: 232712-232957 bp Feature: gene Location: 233030-233269 bp Feature: domain Description: DUF2281 Location: 233063-233180 bp Feature: domain Description: DUF2 2 81 Location: 2 33063-2 33180 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_1 (pfam01609), UvrD (COG0210), RVT-UG19, DUF2281 (pfam10047)