myRT

myRT report for GCA_012910815.1_ASM1291081v1

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Seq: WTVI01000103.1 Azoarcus communis SWub3 = DSM 12120 strain SWub3 NODE_103_length_2212_cov_81.2734_ID_9182, whole genome shotgun sequence (2212 bp)
Overview 1 RT 1: 1-2051 bp Neighborhood of RT #1 [1, 2209] group_II_RT_mat RVT-GII RHS Feature: gene Location: 1-135 bp Feature: gene Location: 201-653 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 249-540 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 249-540 bp Feature: gene Location: 695-1432 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 899-1424 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 899-1 424 bp Feature: gene Location: 1425-1781 bp Feature: gene Location: 1838-2209 bp Feature: domain Description: RHS Location: 1982-2051 bp Feature: domain Description: RHS Location: 1 982-2051 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT group_II_RT_mat (TIGR04416), RVT-GII, RHS (pfam03527)

Seq: WTVI01000112.1 Azoarcus communis SWub3 = DSM 12120 strain SWub3 NODE_114_length_1476_cov_165.046_ID_9204, whole genome shotgun sequence (1476 bp)
Overview 1 RT 1: 2-1473 bp Neighborhood of RT #1 [2, 1473] RVT-GII Feature: gene Location: 2-790 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 206-791 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 06-791 bp Feature: gene Location: 899-1042 bp Feature: gene Location: 1315-1473 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: WTVI01000091.1 Azoarcus communis SWub3 = DSM 12120 strain SWub3 NODE_91_length_3511_cov_68.4255_ID_9158, whole genome shotgun sequence (3511 bp)
Overview 1 RT 1: 1-1287 bp Neighborhood of RT #1 [1, 1295] RVT-GII GIIM Dimer_Tnp_Tn5 PRK00222 Feature: gene Location: 1-588 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4-199 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4-199 bp Feature: domain Description: GIIM Note: maturase Location: 283-499 bp Feature: domain Description: GIIM Note: maturase Location: 283 -499 bp Feature: gene Location: 677-1054 bp Feature: domain Description: Dimer_Tnp_Tn5 Location: 761-1028 bp Feature: domain Description: Dimer_Tnp_Tn5 Location: 761-1028 bp Feature: gene Location: 1092-1295 bp Feature: domain Description: PRK00222 Location: 1104-1287 bp Feature: domain Description: PRK00222 Location: 1104-1287 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), Dimer_Tnp_Tn5 (pfam02281), PRK00222 (peptide-methionine (R)-S-oxide reductase MsrB)

Seq: WTVI01000092.1 Azoarcus communis SWub3 = DSM 12120 strain SWub3 NODE_92_length_3404_cov_82.549_ID_9160, whole genome shotgun sequence (3404 bp)
Overview 1 RT 1: 770-3132 bp Neighborhood of RT #1 [770, 3401] WD40 WD40 RVT-GII Feature: gene Location: 770-1891 bp Feature: domain Description: WD40 Location: 917-1079 bp Feature: domain Description: WD4 0 Location: 917-1079 bp Feature: domain Description: WD40 Location: 1451-1838 bp Feature: domain Description: WD4 0 Location: 14 51-1838 bp Feature: gene Location: 1894-2811 bp Feature: gene Location: 2970-3401 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2973-3132 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2973-3132 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT WD40 (smart00320), RVT-GII