myRT

myRT report for GCA_012911775.1_ASM1291177v1

Download annotations/find similar RTs

Seq: JAAQQL010000027.1 Streptococcus pneumoniae strain BS7073F Contig_27, whole genome shotgun sequence (22825 bp)
Overview 1 RT 1: 9317-14370 bp Neighborhood of RT #1 [9317, 14370] DUF3687 MFS_MefA_like RVT-GII GIIM Feature: gene Location: 9317-9448 bp Feature: domain Description: DUF3687 Location: 9329-9446 bp Feature: domain Description: DUF3687 Location: 9329-9446 bp Feature: gene Location: 9762-10940 bp Feature: domain Description: MFS_MefA_like Location: 9777-10920 bp Feature: domain Description: MFS_MefA_like Location: 9777-1 0920 bp Feature: gene Location: 11396-12673 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11600-12215 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 600-1 221 5 bp Feature: domain Description: GIIM Note: maturase Location: 12269-12482 bp Feature: domain Description: GIIM Note: maturase Location: 1 2269-1 2482 bp Feature: gene Location: 13432-13629 bp Feature: gene Location: 13783-14370 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), DUF3687 (pfam12459), MFS_MefA_like (cd06173)

Seq: JAAQQL010000037.1 Streptococcus pneumoniae strain BS7073F Contig_37, whole genome shotgun sequence (9881 bp)
Overview 1 RT 1: 4354-9627 bp Neighborhood of RT #1 [4354, 9725] NDP-sugDHase HTH_XRE RGG_Cterm RVT-GII GIIM HTH_19 Feature: gene Location: 4354-5649 bp Feature: domain Description: NDP-sugDHase Location: 4399-5560 bp Feature: domain Description: NDP-sugDHase Location: 4399-5560 bp Feature: gene Location: 5901-6755 bp Feature: domain Description: HTH_XRE Location: 5982-6087 bp Feature: domain Description: HTH_XRE Location: 5982 -6087 bp Feature: domain Description: RGG_Cterm Location: 6090-6750 bp Feature: domain Description: RGG_Cterm Location: 6090-6750 bp Feature: gene Location: 7127-8293 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7331-7946 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7331-7946 bp Feature: domain Description: GIIM Note: maturase Location: 8003-8213 bp Feature: domain Description: GIIM Note: maturase Location: 8003-82 13 bp Feature: gene Location: 9029-9385 bp Feature: gene Location: 9435-9725 bp Feature: domain Description: HTH_19 Location: 9459-9627 bp Feature: domain Description: HTH_19 Location: 9459-962 7 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT NDP-sugDHase (TIGR03026), HTH_XRE (smart00530), RGG_Cterm (TIGR01716), RVT-GII, GIIM (pfam08388), HTH_19 (pfam12844)