myRT

myRT report for GCA_012927205.1_ASM1292720v1

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Seq: JABBGC010000002.1 Chitinophaga sp. G-6-1-13 contig2, whole genome shotgun sequence (1756193 bp)
Overview 1 RT 1: 310914-321938 bp Neighborhood of RT #1 [310914, 321946] WGR_DNA_ligase HEAT_2 SWIM RVT-Retrons CarbopepD_reg_2 ligand_gated_channel MET2 Feature: gene Location: 310914-314246 bp Feature: domain Description: WGR_DNA_ligase Location: 310932-311145 bp Feature: domain Description: WGR_DNA_ligase Location: 31 0932-31 1 1 45 bp Feature: domain Description: HEAT_2 Location: 311292-311487 bp Feature: domain Description: HEAT_2 Location: 31 1 292-31 1 487 bp Feature: gene Location: 314252-315904 bp Feature: domain Description: SWIM Location: 315776-315869 bp Feature: domain Description: SWIM Location: 31 5776-31 5869 bp Feature: gene Location: 316221-317882 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 316854-317472 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 31 6854-31 7472 bp Feature: gene Location: 317968-320835 bp Feature: domain Description: CarbopepD_reg_2 Location: 318058-318310 bp Feature: domain Description: CarbopepD_reg_2 Location: 31 8058-31 831 0 bp Feature: domain Description: ligand_gated_channel Location: 318361-320809 bp Feature: domain Description: ligand_gated_channel Location: 31 8361 -320809 bp Feature: gene Location: 320933-321946 bp Feature: domain Description: MET2 Location: 320945-321938 bp Feature: domain Description: MET2 Location: 320945-321 938 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT WGR_DNA_ligase (cd07998), HEAT_2 (pfam13646), SWIM (pfam04434), RVT-Retrons, CarbopepD_reg_2 (pfam13715), ligand_gated_channel (cd01347), MET2 (COG2021)