myRT

myRT report for GCA_012927265.1_ASM1292726v1

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Seq: JABBGF010000001.1 Chryseobacterium sp. RJ-7-14 contig1, whole genome shotgun sequence (2336728 bp)
Overview 1 RT 1: 111306-117135 bp Neighborhood of RT #1 [111306, 117135] VirE_N PriCT_2 RVT-UG28b HNHc Feature: gene Location: 111306-111512 bp Feature: gene Location: 111568-112554 bp Feature: domain Description: VirE_N Location: 111739-112117 bp Feature: domain Description: VirE_N Location: 1 1 1 739-1 1 21 1 7 bp Feature: domain Description: PriCT_2 Location: 112321-112534 bp Feature: domain Description: PriCT_2 Location: 1 1 2321 -1 1 2534 bp Feature: gene Location: 112719-114659 bp Feature: RT Description: RVT-UG28b Note: UG28b RT Location: 113154-113877 bp Feature: RT Description: RVT-UG28b Note: UG28b RT Location: 1 1 31 54-1 1 3877 bp Feature: gene Location: 114805-115512 bp Feature: domain Description: HNHc Note: nucleases Location: 114841-115015 bp Feature: domain Description: HNHc Note: nucleases Location: 1 1 4841 -1 1 501 5 bp Feature: gene Location: 115618-117135 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT VirE_N (pfam08800), PriCT_2 (pfam08707), RVT-UG28b, HNHc (smart00507)

Seq: JABBGF010000003.1 Chryseobacterium sp. RJ-7-14 contig3, whole genome shotgun sequence (634598 bp)
Overview 1 RT 1: 167686-173552 bp Neighborhood of RT #1 [167686, 173596] RVT-Retrons NA37 Feature: gene Location: 167686-169200 bp Feature: gene Location: 169255-169893 bp Feature: gene Location: 169914-171062 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 170178-170805 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 170178-170805 bp Feature: gene Location: 171244-172554 bp Feature: gene Location: 172568-173596 bp Feature: domain Description: NA37 Location: 172610-173552 bp Feature: domain Description: NA37 Location: 172 610-173552 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, NA37 (pfam04245)