myRT

myRT report for GCA_012927275.1_ASM1292727v1

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Seq: JABBGG010000001.1 Massilia sp. RP-1-19 contig1, whole genome shotgun sequence (809011 bp)
Overview 1 RT 1: 424316-429367 bp Neighborhood of RT #1 [424316, 429387] TnpB_IS66 LZ_Tnp_IS66 DDE_Tnp_IS66 DDE_Tnp_IS66_C RVT-GII GIIM PG_binding_1 Feature: gene Location: 424316-424699 bp Feature: domain Description: TnpB_IS66 Location: 424343-424634 bp Feature: domain Description: TnpB_IS66 Location: 424343-424634 bp Feature: gene Location: 424707-426320 bp Feature: domain Description: LZ_Tnp_IS66 Location: 424815-424932 bp Feature: domain Description: LZ_Tnp_IS66 Location: 42481 5-424932 bp Feature: domain Description: DDE_Tnp_IS66 Location: 425259-426105 bp Feature: domain Description: DDE_Tnp_IS66 Location: 425259-4261 05 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 426126-426234 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 4261 26-426234 bp Feature: gene Location: 426425-426982 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 426431-426686 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 426431 -426686 bp Feature: domain Description: GIIM Note: maturase Location: 426767-426965 bp Feature: domain Description: GIIM Note: maturase Location: 426767-426965 bp Feature: gene Location: 427274-428668 bp Feature: gene Location: 428788-429387 bp Feature: domain Description: PG_binding_1 Location: 429226-429367 bp Feature: domain Description: PG_binding_1 Location: 429226-429367 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TnpB_IS66 (pfam05717), LZ_Tnp_IS66 (pfam13007), DDE_Tnp_IS66 (pfam03050), DDE_Tnp_IS66_C (pfam13817), RVT-GII, GIIM (pfam08388), PG_binding_1 (pfam01471)