myRT

myRT report for GCA_012927555.1_ASM1292755v1

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Seq: JABBOX010000279.1 Phycicoccus sp. isolate KJC.3 NODE_298_length_8576_cov_2.81183, whole genome shotgun sequence (8576 bp)
Overview 1 RT 1: 102-4014 bp Neighborhood of RT #1 [102, 4046] Tra8 RVT-GII GIIM Tas Feature: gene Location: 102-500 bp Feature: domain Description: Tra8 Location: 108-480 bp Feature: domain Description: Tra8 Location: 1 08-480 bp Feature: gene Location: 654-2108 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 978-1662 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 978-1 662 bp Feature: domain Description: GIIM Note: maturase Location: 1740-1959 bp Feature: domain Description: GIIM Note: maturase Location: 1 740-1 959 bp Feature: gene Location: 2539-2838 bp Feature: gene Location: 3060-4046 bp Feature: domain Description: Tas Location: 3063-4014 bp Feature: domain Description: Tas Location: 3063-401 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Tas (COG0667), RVT-GII, GIIM (pfam08388)

Seq: JABBOX010000074.1 Phycicoccus sp. isolate KJC.3 NODE_400_length_5593_cov_2.7606, whole genome shotgun sequence (5593 bp)
Overview 1 RT 1: 1-5571 bp Neighborhood of RT #1 [1, 5591] YhhI YhhI RVT-GII GIIM TrwC AAA_30 PRK13889 Feature: gene Location: 1-900 bp Feature: domain Description: YhhI Location: 238-418 bp Feature: domain Description: YhhI Location: 2 38-418 bp Feature: domain Description: YhhI Location: 661-814 bp Feature: domain Description: YhhI Location: 661-814 bp Feature: gene Location: 1479-2732 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1695-2355 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1695-2 355 bp Feature: domain Description: GIIM Note: maturase Location: 2442-2640 bp Feature: domain Description: GIIM Note: maturase Location: 2 442 -2 640 bp Feature: gene Location: 3216-5591 bp Feature: domain Description: TrwC Location: 3258-4131 bp Feature: domain Description: TrwC Location: 32 58-4131 bp Feature: domain Description: AAA_30 Location: 4593-5208 bp Feature: domain Description: AAA_30 Location: 4593-52 08 bp Feature: domain Description: PRK13889 Location: 5388-5571 bp Feature: domain Description: PRK13889 Location: 5388-5571 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), YhhI (COG5433)