myRT

myRT report for GCA_012933275.1_ASM1293327v1

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Seq: JABBXY010000119.1 Enterococcus faecium strain A13828, whole genome shotgun sequence (2559 bp)
Overview 1 RT 1: 1-1895 bp Neighborhood of RT #1 [1, 2557] HsdM RVT-AbiP2 Feature: gene Location: 1-783 bp Feature: domain Description: HsdM Location: 22-784 bp Feature: domain Description: HsdM Location: 22-784 bp Feature: gene Location: 1121-2557 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 1430-1895 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 1 430-1 895 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HsdM (COG0286), RVT-AbiP2

Seq: JABBXY010000013.1 Enterococcus faecium strain A13828, whole genome shotgun sequence (62474 bp)
Overview 1 RT 1: 41045-44898 bp Neighborhood of RT #1 [41045, 45146] RVT-GII HNHc PolY_Pol_V_umuC Feature: gene Location: 41045-41179 bp Feature: gene Location: 41457-41651 bp Feature: gene Location: 41872-43734 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 42181-42919 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 42 181-42 919 bp Feature: domain Description: HNHc Note: nucleases Location: 43483-43603 bp Feature: domain Description: HNHc Note: nucleases Location: 43483-43603 bp Feature: gene Location: 43739-43867 bp Feature: gene Location: 43905-45146 bp Feature: domain Description: PolY_Pol_V_umuC Location: 43935-44898 bp Feature: domain Description: PolY_Pol_V_umuC Location: 43935-44898 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507), PolY_Pol_V_umuC (cd01700)

Seq: JABBXY010000072.1 Enterococcus faecium strain A13828, whole genome shotgun sequence (9818 bp)
Overview 1 RT 1: 70-5923 bp Neighborhood of RT #1 [70, 6042] VirB4 RVT-GII HNHc Glucosaminidase Peptidase_M23 Feature: gene Location: 70-1764 bp Feature: domain Description: VirB4 Location: 388-1072 bp Feature: domain Description: VirB4 Location: 3 88-1072 bp Feature: gene Location: 2032-2265 bp Feature: gene Location: 2452-4329 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2767-3505 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2767-3 505 bp Feature: domain Description: HNHc Note: nucleases Location: 4063-4216 bp Feature: domain Description: HNHc Note: nucleases Location: 4063 -4216 bp Feature: gene Location: 4517-4837 bp Feature: gene Location: 4837-6042 bp Feature: domain Description: Glucosaminidase Location: 5113-5509 bp Feature: domain Description: Glucosaminidase Location: 5113 -5509 bp Feature: domain Description: Peptidase_M23 Location: 5686-5923 bp Feature: domain Description: Peptidase_M23 Location: 5686-5923 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT VirB4 (COG3451), RVT-GII, HNHc (smart00507), Glucosaminidase (pfam01832), Peptidase_M23 (pfam01551)