myRT

myRT report for GCA_012933365.1_ASM1293336v1

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Seq: JABBVZ010000016.1 Sulfobacillus sp. DSM 109850 NODE_16_length_60144_cov_110.723176, whole genome shotgun sequence (60144 bp)
Overview 1 RT 1: 155-2118 bp Neighborhood of RT #1 [155, 2165] RVT-GII GIIM spore_YkwD Feature: gene Location: 155-292 bp Feature: gene Location: 236-829 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 239-443 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 239-443 bp Feature: domain Description: GIIM Note: maturase Location: 515-731 bp Feature: domain Description: GIIM Note: maturase Location: 51 5-731 bp Feature: gene Location: 1009-1161 bp Feature: gene Location: 1341-2165 bp Feature: domain Description: spore_YkwD Location: 1776-2118 bp Feature: domain Description: spore_YkwD Location: 1 776-21 1 8 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT spore_YkwD (TIGR02909), RVT-GII, GIIM (pfam08388)

Seq: JABBVZ010000020.1 Sulfobacillus sp. DSM 109850 NODE_20_length_49835_cov_56.114655, whole genome shotgun sequence (49835 bp)
Overview 1 RT 1: 3-1813 bp Neighborhood of RT #1 [3, 1827] RVT-GII SASP Feature: gene Location: 3-140 bp Feature: gene Location: 222-944 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 387-867 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 387-867 bp Feature: gene Location: 1072-1527 bp Feature: gene Location: 1618-1827 bp Feature: domain Description: SASP Location: 1636-1813 bp Feature: domain Description: SASP Location: 1636-1813 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SASP (pfam00269), RVT-GII

Seq: JABBVZ010000222.1 Sulfobacillus sp. DSM 109850 NODE_222_length_2299_cov_515.678218, whole genome shotgun sequence (2299 bp)
Overview 1 RT 1: 1-1490 bp Neighborhood of RT #1 [1, 1864] RVT-GII Feature: gene Location: 1-189 bp Feature: gene Location: 542-1864 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 797-1490 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 797-1490 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: JABBVZ010000250.1 Sulfobacillus sp. DSM 109850 NODE_250_length_1596_cov_907.626070, whole genome shotgun sequence (1596 bp)
Overview 1 RT 1: 283-1402 bp Neighborhood of RT #1 [283, 1503] RVT-GII GIIM Feature: gene Location: 283-1503 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 505-1132 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 505-1132 bp Feature: domain Description: GIIM Note: maturase Location: 1198-1402 bp Feature: domain Description: GIIM Note: maturase Location: 1198-14 02 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: JABBVZ010000279.1 Sulfobacillus sp. DSM 109850 NODE_279_length_1247_cov_67.087179, whole genome shotgun sequence (1247 bp)
Overview 1 RT 1: 51-582 bp Neighborhood of RT #1 [51, 590] RVT-GII Feature: gene Location: 51-590 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 255-582 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25 5 -5 82 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: JABBVZ010000291.1 Sulfobacillus sp. DSM 109850 NODE_291_length_1037_cov_2063.622917, whole genome shotgun sequence (1037 bp)
Overview 1 RT 1: 3-1037 bp Neighborhood of RT #1 [3, 1036] RVT-GII Feature: gene Location: 3-182 bp Feature: gene Location: 173-1036 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 428-1037 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 428-1037 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: JABBVZ010000029.1 Sulfobacillus sp. DSM 109850 NODE_29_length_42454_cov_102.048092, whole genome shotgun sequence (42454 bp)
Overview 1 RT 1: 3656-7996 bp Neighborhood of RT #1 [3656, 8061] ParE_toxin Unstab_antitox RVT-GII GIIM RVT-GII phn_DUF6 Feature: gene Location: 3656-3955 bp Feature: domain Description: ParE_toxin Location: 3674-3866 bp Feature: domain Description: ParE_toxin Location: 367 4-3866 bp Feature: gene Location: 3948-4211 bp Feature: domain Description: Unstab_antitox Location: 4020-4179 bp Feature: domain Description: Unstab_antitox Location: 4020-417 9 bp Feature: gene Location: 4548-5234 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4554-4827 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4554-4827 bp Feature: domain Description: GIIM Note: maturase Location: 4908-5127 bp Feature: domain Description: GIIM Note: maturase Location: 4908-5127 bp Feature: gene Location: 5548-6132 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5752-6130 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 57 52-6130 bp Feature: gene Location: 6131-6499 bp Feature: gene Location: 7246-8061 bp Feature: domain Description: phn_DUF6 Location: 7264-7996 bp Feature: domain Description: phn_DUF6 Location: 7 264-7 996 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ParE_toxin (pfam05016), Unstab_antitox (pfam09720), RVT-GII, GIIM (pfam08388), phn_DUF6 (TIGR03340)

Seq: JABBVZ010000048.1 Sulfobacillus sp. DSM 109850 NODE_48_length_26837_cov_75.565471, whole genome shotgun sequence (26837 bp)
Overview 1 RT 1: 1-3207 bp Neighborhood of RT #1 [1, 3248] RVT-GII GIIM RVT-GII GIIM UlaG NirD Feature: gene Location: 1-807 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 70-421 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 70-421 bp Feature: domain Description: GIIM Note: maturase Location: 502-721 bp Feature: domain Description: GIIM Note: maturase Location: 502-721 bp Feature: gene Location: 859-1338 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 886-1036 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8 8 6-1036 bp Feature: domain Description: GIIM Note: maturase Location: 1102-1267 bp Feature: domain Description: GIIM Note: maturase Location: 1102-1267 bp Feature: gene Location: 1532-1660 bp Feature: gene Location: 1701-3248 bp Feature: domain Description: UlaG Location: 1704-2319 bp Feature: domain Description: UlaG Location: 1704-2319 bp Feature: domain Description: NirD Location: 3069-3207 bp Feature: domain Description: NirD Location: 3069-3207 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), UlaG (COG2220), NirD (COG2146)

Seq: JABBVZ010000066.1 Sulfobacillus sp. DSM 109850 NODE_66_length_20005_cov_89.817543, whole genome shotgun sequence (20005 bp)
Overview 1 RT 1: 1-3330 bp Neighborhood of RT #1 [1, 3455] RVT-GII pyrF_sub2 Feature: gene Location: 1-291 bp Feature: gene Location: 757-2136 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1069-1762 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1069 -1762 bp Feature: gene Location: 2220-2429 bp Feature: gene Location: 2442-3455 bp Feature: domain Description: pyrF_sub2 Location: 2544-3330 bp Feature: domain Description: pyrF_sub2 Location: 2544-3330 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT pyrF_sub2 (TIGR02127), RVT-GII

Seq: JABBVZ010000080.1 Sulfobacillus sp. DSM 109850 NODE_80_length_15432_cov_158.109606, whole genome shotgun sequence (15432 bp)
Overview 1 RT 1: 13344-14986 bp Neighborhood of RT #1 [13344, 15348] Acetyltransf_1 RVT-GII Feature: gene Location: 13344-13490 bp Feature: gene Location: 13731-14069 bp Feature: domain Description: Acetyltransf_1 Location: 13782-14025 bp Feature: domain Description: Acetyltransf_1 Location: 13782-14025 bp Feature: gene Location: 14194-15348 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14296-14986 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14296-14986 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Acetyltransf_1 (pfam00583), RVT-GII

Seq: JABBVZ010000009.1 Sulfobacillus sp. DSM 109850 NODE_9_length_78146_cov_116.324303, whole genome shotgun sequence (78146 bp)
Overview 1 RT 1: 49432-54073 bp 2 RT 2: 60092-65564 bp Neighborhood of RT #1 [49432, 54291] DsrE NifS RVT-GII GIIM zf-ISL3 HTH_Tnp_ISL3 DDE_Tnp_ISL3 Neighborhood of RT #2 [60092, 65584] LZ_Tnp_IS66 zf-IS66 DDE_Tnp_IS66 DDE_Tnp_IS66_C RVT-GII GIIM ArgO HpaA AraC Feature: gene Location: 49432-49782 bp Feature: domain Description: DsrE Location: 49435-49777 bp Feature: domain Description: DsrE Location: 49435-49777 bp Feature: gene Location: 49806-51071 bp Feature: domain Description: NifS Location: 49944-51057 bp Feature: domain Description: NifS Location: 49944-51057 bp Feature: gene Location: 51458-52753 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 51689-52346 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 51689-52346 bp Feature: domain Description: GIIM Note: maturase Location: 52427-52646 bp Feature: domain Description: GIIM Note: maturase Location: 52427-52646 bp Feature: gene Location: 52913-53422 bp Feature: domain Description: zf-ISL3 Location: 53042-53171 bp Feature: domain Description: zf-ISL3 Location: 53042-53171 bp Feature: domain Description: HTH_Tnp_ISL3 Location: 53195-53333 bp Feature: domain Description: HTH_Tnp_ISL3 Location: 53195-53333 bp Feature: gene Location: 53419-54291 bp Feature: domain Description: DDE_Tnp_ISL3 Location: 53431-54073 bp Feature: domain Description: DDE_Tnp_ISL3 Location: 53431-54073 bp Feature: gene Location: 60092-60382 bp Feature: domain Description: LZ_Tnp_IS66 Location: 60194-60371 bp Feature: domain Description: LZ_Tnp_IS66 Location: 60194-60371 bp Feature: gene Location: 60467-61678 bp Feature: domain Description: zf-IS66 Location: 60476-60563 bp Feature: domain Description: zf-IS66 Location: 60476-60563 bp Feature: domain Description: DDE_Tnp_IS66 Location: 60626-61481 bp Feature: domain Description: DDE_Tnp_IS66 Location: 60626-61481 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 61502-61622 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 61502-61622 bp Feature: gene Location: 61818-63557 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 62481-63171 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 62481-63171 bp Feature: domain Description: GIIM Note: maturase Location: 63243-63459 bp Feature: domain Description: GIIM Note: maturase Location: 63243-63459 bp Feature: gene Location: 63973-64617 bp Feature: domain Description: ArgO Location: 63985-64576 bp Feature: domain Description: ArgO Location: 63985-64576 bp Feature: gene Location: 64727-65584 bp Feature: domain Description: HpaA Location: 64913-65102 bp Feature: domain Description: HpaA Location: 64913-65102 bp Feature: domain Description: AraC Location: 65201-65564 bp Feature: domain Description: AraC Location: 65201-65564 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DsrE (COG1553), NifS (COG1104), RVT-GII, GIIM (pfam08388), zf-ISL3 (pfam14690), HTH_Tnp_ISL3 (pfam13542), DDE_Tnp_ISL3 (pfam01610), LZ_Tnp_IS66 (pfam13007), zf-IS66 (pfam13005), DDE_Tnp_IS66 (pfam03050)
DDE_Tnp_IS66_C (pfam13817), ArgO (COG1279), HpaA (TIGR02297), AraC (COG2207)