myRT

myRT report for GCA_012933555.1_ASM1293355v1

Download annotations/find similar RTs

Seq: JABBPK010000001.1 Bacillus sp. UniB3, whole genome shotgun sequence (5233187 bp)
Overview 1 RT 1: 629708-636687 bp 2 RT 2: 680291-684957 bp 3 RT 3: 1215815-1221722 bp 4 RT 4: 1951662-1959049 bp 5 RT 5: 2867816-2872349 bp 6 RT 6: 3248742-3255815 bp Neighborhood of RT #1 [629708, 636707] pcrA RVT-GII HNHc pcrA ligA Neighborhood of RT #2 [680291, 684974] Transposase_mut Tra5 RVT-GII DUF3231 Neighborhood of RT #3 [1215815, 1221745] HTH_ARSR RVT-GII HNHc PRK11660 FocA Neighborhood of RT #4 [1951662, 1959066] LdcC PRK04387 RVT-GII HNHc YktB DDE_Tnp_1_4 Neighborhood of RT #5 [2867816, 2872349] rpmG YejR RVT-GII GIIM nitrilase Neighborhood of RT #6 [3248742, 3255820] PRK08115 RVT-GII HNHc PRK08115 LplA Feature: gene Location: 629708-630406 bp Feature: domain Description: pcrA Location: 629735-630392 bp Feature: domain Description: pcrA Location: 629735-630392 bp Feature: gene Location: 630547-630678 bp Feature: gene Location: 631138-633018 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 631465-632200 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 631 465-632200 bp Feature: domain Description: HNHc Note: nucleases Location: 632755-632893 bp Feature: domain Description: HNHc Note: nucleases Location: 632755-632893 bp Feature: gene Location: 633079-634662 bp Feature: domain Description: pcrA Location: 633115-634654 bp Feature: domain Description: pcrA Location: 6331 1 5-634654 bp Feature: gene Location: 634683-636707 bp Feature: domain Description: ligA Location: 634698-636687 bp Feature: domain Description: ligA Location: 634698-636687 bp Feature: gene Location: 680291-681460 bp Feature: domain Description: Transposase_mut Location: 680294-681419 bp Feature: domain Description: Transposase_mut Location: 680294-681 41 9 bp Feature: gene Location: 681541-682170 bp Feature: domain Description: Tra5 Location: 681571-682000 bp Feature: domain Description: Tra5 Location: 681 571 -682000 bp Feature: gene Location: 682934-683209 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 683000-683129 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 683000-6831 29 bp Feature: gene Location: 683804-684148 bp Feature: gene Location: 684714-684974 bp Feature: domain Description: DUF3231 Location: 684720-684957 bp Feature: domain Description: DUF3231 Location: 684720-684957 bp Feature: gene Location: 1215815-1216153 bp Feature: domain Description: HTH_ARSR Location: 1215860-1216076 bp Feature: domain Description: HTH_ARSR Location: 1 21 5860-1 21 6076 bp Feature: gene Location: 1216302-1216433 bp Feature: gene Location: 1216893-1218773 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1217220-1217955 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 21 7220-1 21 7955 bp Feature: domain Description: HNHc Note: nucleases Location: 1218510-1218648 bp Feature: domain Description: HNHc Note: nucleases Location: 1 21 851 0-1 21 8648 bp Feature: gene Location: 1218893-1220641 bp Feature: domain Description: PRK11660 Location: 1218926-1220510 bp Feature: domain Description: PRK1 1 660 Location: 1 21 8926-1 22051 0 bp Feature: gene Location: 1220957-1221745 bp Feature: domain Description: FocA Location: 1220987-1221722 bp Feature: domain Description: FocA Location: 1 220987-1 221 722 bp Feature: gene Location: 1951662-1953131 bp Feature: domain Description: LdcC Location: 1951668-1953120 bp Feature: domain Description: LdcC Location: 1 951 668-1 9531 20 bp Feature: gene Location: 1953510-1953782 bp Feature: domain Description: PRK04387 Location: 1953513-1953771 bp Feature: domain Description: PRK04387 Location: 1 95351 3-1 953771 bp Feature: gene Location: 1954613-1956400 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1954886-1955579 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 954886-1 955579 bp Feature: domain Description: HNHc Note: nucleases Location: 1956140-1956278 bp Feature: domain Description: HNHc Note: nucleases Location: 1 9561 40-1 956278 bp Feature: gene Location: 1956781-1957401 bp Feature: domain Description: YktB Location: 1956784-1957393 bp Feature: domain Description: YktB Location: 1 956784-1 957393 bp Feature: gene Location: 1957720-1959066 bp Feature: domain Description: DDE_Tnp_1_4 Location: 1957765-1959049 bp Feature: domain Description: DDE_Tnp_1 _4 Location: 1 957765-1 959049 bp Feature: gene Location: 2867816-2867965 bp Feature: domain Description: rpmG Location: 2867819-2867963 bp Feature: domain Description: rpmG Location: 286781 9-2867963 bp Feature: gene Location: 2868004-2869194 bp Feature: domain Description: YejR Location: 2868031-2869132 bp Feature: domain Description: YejR Location: 2868031 -28691 32 bp Feature: gene Location: 2869647-2870909 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2869851-2870508 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2869851 -2870508 bp Feature: domain Description: GIIM Note: maturase Location: 2870589-2870805 bp Feature: domain Description: GIIM Note: maturase Location: 2870589-2870805 bp Feature: gene Location: 2871433-2871996 bp Feature: domain Description: nitrilase Location: 2871499-2871964 bp Feature: domain Description: nitrilase Location: 2871 499-2871 964 bp Feature: gene Location: 2872083-2872349 bp Feature: gene Location: 3248742-3248960 bp Feature: gene Location: 3249232-3250401 bp Feature: domain Description: PRK08115 Location: 3249235-3250399 bp Feature: domain Description: PRK081 1 5 Location: 3249235-3250399 bp Feature: gene Location: 3250581-3252368 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3250854-3251547 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3250854-3251 547 bp Feature: domain Description: HNHc Note: nucleases Location: 3252108-3252246 bp Feature: domain Description: HNHc Note: nucleases Location: 32521 08-3252246 bp Feature: gene Location: 3253094-3254500 bp Feature: domain Description: PRK08115 Location: 3253103-3254471 bp Feature: domain Description: PRK081 1 5 Location: 32531 03-3254471 bp Feature: gene Location: 3254984-3255820 bp Feature: domain Description: LplA Location: 3255002-3255815 bp Feature: domain Description: LplA Location: 3255002-325581 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT pcrA (TIGR01073), RVT-GII, HNHc (smart00507), ligA (PRK14351), Transposase_mut (pfam00872), Tra5 (COG2801), DUF3231 (pfam11553), HTH_ARSR (smart00418), PRK11660 (putative transporter; Provisional), FocA (COG2116)
LdcC (COG1982), PRK04387 (hypothetical protein; Provisional), YktB (COG4493), DDE_Tnp_1_4 (pfam13701), rpmG (PRK00595), YejR (COG0523), GIIM (pfam08388), nitrilase (cl11424), PRK08115 (vitamin B12-dependent ribonucleotide reductase), LplA (COG0095)