myRT

myRT report for GCA_012933655.1_ASM1293365v1

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Seq: JABBJJ010000287.1 Pyxidicoccus fallax strain DSM 14698 NODE_287_length_16063_cov_41.5531, whole genome shotgun sequence (16063 bp)
Overview 1 RT 1: 577-13416 bp Neighborhood of RT #1 [577, 13436] KOG0266 KOG0266 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 RVT-Retrons DAP2 BetA BetA BetA Feature: gene Location: 577-7191 bp Feature: domain Description: KOG0266 Location: 745-1186 bp Feature: domain Description: KOG0266 Location: 745-1 1 86 bp Feature: domain Description: KOG0266 Location: 1258-1432 bp Feature: domain Description: KOG0266 Location: 1 258-1 432 bp Feature: domain Description: HEAT_2 Location: 1654-1870 bp Feature: domain Description: HEAT_2 Location: 1 654-1 870 bp Feature: domain Description: HEAT_2 Location: 2419-2671 bp Feature: domain Description: HEAT_2 Location: 241 9-2671 bp Feature: domain Description: HEAT_2 Location: 2710-2908 bp Feature: domain Description: HEAT_2 Location: 271 0-2908 bp Feature: domain Description: HEAT_2 Location: 2908-3112 bp Feature: domain Description: HEAT_2 Location: 2908-31 1 2 bp Feature: domain Description: HEAT_2 Location: 3574-3730 bp Feature: domain Description: HEAT_2 Location: 3574-3730 bp Feature: domain Description: HEAT_2 Location: 3850-3985 bp Feature: domain Description: HEAT_2 Location: 3850-3985 bp Feature: domain Description: HEAT_2 Location: 4480-4711 bp Feature: domain Description: HEAT_2 Location: 4480-471 1 bp Feature: domain Description: HEAT_2 Location: 4756-4987 bp Feature: domain Description: HEAT_2 Location: 4756-4987 bp Feature: domain Description: HEAT_2 Location: 5128-5401 bp Feature: domain Description: HEAT_2 Location: 51 28-5401 bp Feature: domain Description: HEAT_2 Location: 5863-6109 bp Feature: domain Description: HEAT_2 Location: 5863-61 09 bp Feature: domain Description: HEAT_2 Location: 6613-6844 bp Feature: domain Description: HEAT_2 Location: 661 3-6844 bp Feature: gene Location: 7188-9038 bp Feature: gene Location: 9442-10899 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 10000-10642 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 0000-1 0642 bp Feature: gene Location: 10903-11769 bp Feature: domain Description: DAP2 Location: 11029-11608 bp Feature: domain Description: DAP2 Location: 1 1 029-1 1 608 bp Feature: gene Location: 11910-13436 bp Feature: domain Description: BetA Location: 11919-12423 bp Feature: domain Description: BetA Location: 1 1 91 9-1 2423 bp Feature: domain Description: BetA Location: 12540-12870 bp Feature: domain Description: BetA Location: 1 2540-1 2870 bp Feature: domain Description: BetA Location: 13002-13416 bp Feature: domain Description: BetA Location: 1 3002-1 341 6 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DAP2 (COG1506), KOG0266 (KOG0266, WD40 repeat-containing protein ), HEAT_2 (pfam13646), RVT-Retrons

Seq: JABBJJ010000521.1 Pyxidicoccus fallax strain DSM 14698 NODE_521_length_5961_cov_31.2689, whole genome shotgun sequence (5961 bp)
Overview 1 RT 1: 3-5733 bp Neighborhood of RT #1 [3, 5960] ATS1 RCC1_2 ATS1 ATS1 RCC1_2 ATS1 ATS1 rpt_mate_G_obs LRR_AMN1 RVT-Retrons Feature: gene Location: 3-3917 bp Feature: domain Description: ATS1 Location: 9-876 bp Feature: domain Description: ATS1 Location: 9-876 bp Feature: domain Description: RCC1_2 Location: 906-993 bp Feature: domain Description: RCC1_2 Location: 906-993 bp Feature: domain Description: ATS1 Location: 1056-1908 bp Feature: domain Description: ATS1 Location: 1056-1908 bp Feature: domain Description: ATS1 Location: 1956-2802 bp Feature: domain Description: ATS1 Location: 1956-2 802 bp Feature: domain Description: RCC1_2 Location: 2895-2958 bp Feature: domain Description: RCC1_2 Location: 2 895-2 958 bp Feature: domain Description: ATS1 Location: 2994-3582 bp Feature: domain Description: ATS1 Location: 2 994-3582 bp Feature: domain Description: ATS1 Location: 3597-3873 bp Feature: domain Description: ATS1 Location: 3597-3873 bp Feature: gene Location: 3943-4917 bp Feature: domain Description: rpt_mate_G_obs Location: 3958-4072 bp Feature: domain Description: rpt_mate_G_obs Location: 3958-4072 bp Feature: domain Description: LRR_AMN1 Location: 4363-4846 bp Feature: domain Description: LRR_AMN1 Location: 4363-4846 bp Feature: gene Location: 4914-5960 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 5142-5733 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 5142 -5733 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ATS1 (COG5184), RCC1_2 (pfam13540), rpt_mate_G_obs (TIGR02996), LRR_AMN1 (sd00034), RVT-Retrons

Seq: JABBJJ010000008.1 Pyxidicoccus fallax strain DSM 14698 NODE_8_length_91976_cov_40.1837, whole genome shotgun sequence (91976 bp)
Overview 1 RT 1: 17551-24267 bp Neighborhood of RT #1 [17551, 24578] DUF4150 DUF2169 RVT-Retrons HEAT_2 HEAT_2 Feature: gene Location: 17551-18015 bp Feature: domain Description: DUF4150 Location: 17611-17929 bp Feature: domain Description: DUF4150 Location: 17611-17929 bp Feature: gene Location: 18149-19183 bp Feature: domain Description: DUF2169 Location: 18227-19097 bp Feature: domain Description: DUF2169 Location: 18227-19097 bp Feature: gene Location: 19222-20871 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 20002-20608 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 20002-20608 bp Feature: gene Location: 21139-22833 bp Feature: gene Location: 22830-24578 bp Feature: domain Description: HEAT_2 Location: 23598-23877 bp Feature: domain Description: HEAT_2 Location: 23 598-23 877 bp Feature: domain Description: HEAT_2 Location: 24015-24267 bp Feature: domain Description: HEAT_2 Location: 24015-24267 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4150 (pfam13665), DUF2169 (pfam09937), RVT-Retrons, HEAT_2 (pfam13646)