myRT

myRT report for GCA_012952265.1_ASM1295226v1

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Seq: JABCJL010000013.1 Pseudoalteromonas sp. NEC-BIFX-2020_015 NODE_13_length_139900_cov_51.226861, whole genome shotgun sequence (139900 bp)
Overview 1 RT 1: 135139-139899 bp Neighborhood of RT #1 [135139, 139899] PRK08220 FhuE RVT-GII GIIM Feature: gene Location: 135139-135903 bp Feature: domain Description: PRK08220 Location: 135166-135898 bp Feature: domain Description: PRK08220 Location: 1 351 66-1 35898 bp Feature: gene Location: 135980-138076 bp Feature: domain Description: FhuE Location: 136133-138074 bp Feature: domain Description: FhuE Location: 1 361 33-1 38074 bp Feature: gene Location: 138584-139156 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 138599-138791 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 38599-1 38791 bp Feature: domain Description: GIIM Note: maturase Location: 138884-139076 bp Feature: domain Description: GIIM Note: maturase Location: 1 38884-1 39076 bp Feature: gene Location: 139189-139428 bp Feature: gene Location: 139522-139899 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK08220 (2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated), FhuE (COG4773), RVT-GII, GIIM (pfam08388)

Seq: JABCJL010000018.1 Pseudoalteromonas sp. NEC-BIFX-2020_015 NODE_18_length_104005_cov_46.388254, whole genome shotgun sequence (104005 bp)
Overview 1 RT 1: 96-1878 bp Neighborhood of RT #1 [96, 1878] RVT-GII GIIM Feature: gene Location: 96-1307 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 390-1014 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 390-1014 bp Feature: domain Description: GIIM Note: maturase Location: 1053-1263 bp Feature: domain Description: GIIM Note: maturase Location: 1053-12 63 bp Feature: gene Location: 1466-1648 bp Feature: gene Location: 1696-1878 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: JABCJL010000101.1 Pseudoalteromonas sp. NEC-BIFX-2020_015 NODE_192_length_562_cov_49.439080, whole genome shotgun sequence (562 bp)
Overview 1 RT 1: 3-462 bp Neighborhood of RT #1 [3, 560] RVT-GII Feature: gene Location: 3-560 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9-462 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9-462 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: JABCJL010000054.1 Pseudoalteromonas sp. NEC-BIFX-2020_015 NODE_54_length_3698_cov_56.036684, whole genome shotgun sequence (3698 bp)
Overview 1 RT 1: 362-3406 bp Neighborhood of RT #1 [362, 3483] RVT-GII group_II_RT_mat Acetyltransf_1 Feature: gene Location: 362-802 bp Feature: gene Location: 1153-1344 bp Feature: gene Location: 1564-2400 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1819-2392 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1819-2392 bp Feature: gene Location: 2577-2867 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 2589-2760 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 2589-2760 bp Feature: gene Location: 2995-3483 bp Feature: domain Description: Acetyltransf_1 Location: 3115-3406 bp Feature: domain Description: Acetyltransf_1 Location: 3115-34 06 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, group_II_RT_mat (TIGR04416), Acetyltransf_1 (pfam00583)

Seq: JABCJL010000057.1 Pseudoalteromonas sp. NEC-BIFX-2020_015 NODE_57_length_3228_cov_51.495969, whole genome shotgun sequence (3228 bp)
Overview 1 RT 1: 657-3047 bp Neighborhood of RT #1 [657, 3226] TipAS RVT-GII GIIM Feature: gene Location: 657-1610 bp Feature: gene Location: 1859-2251 bp Feature: domain Description: TipAS Location: 1952-2234 bp Feature: domain Description: TipAS Location: 195 2-2234 bp Feature: gene Location: 2330-3226 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2336-2789 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2336-2789 bp Feature: domain Description: GIIM Note: maturase Location: 2828-3047 bp Feature: domain Description: GIIM Note: maturase Location: 2828-3047 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TipAS (pfam07739), RVT-GII, GIIM (pfam08388)

Seq: JABCJL010000071.1 Pseudoalteromonas sp. NEC-BIFX-2020_015 NODE_71_length_1424_cov_230.794140, whole genome shotgun sequence (1424 bp)
Overview 1 RT 1: 260-1421 bp Neighborhood of RT #1 [260, 1423] RVT-GII Feature: gene Location: 260-514 bp Feature: gene Location: 557-1423 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 812-1421 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 812-1421 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: JABCJL010000084.1 Pseudoalteromonas sp. NEC-BIFX-2020_015 NODE_97_length_813_cov_102.801749, whole genome shotgun sequence (813 bp)
Overview 1 RT 1: 3-582 bp Neighborhood of RT #1 [3, 584] RVT-GII Feature: gene Location: 3-584 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 297-582 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 297 -582 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII