myRT

myRT report for GCA_012952335.1_ASM1295233v1

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Seq: JAATHM010000001.1 Klebsiella pneumoniae strain KLP00221, whole genome shotgun sequence (5382251 bp)
Overview 1 RT 1: 1767408-1773879 bp 2 RT 2: 2038609-2046396 bp 3 RT 3: 2661513-2665879 bp 4 RT 4: 3174817-3178670 bp 5 RT 5: 3554205-3558231 bp 6 RT 6: 3563849-3566754 bp 7 RT 7: 4006526-4009978 bp Neighborhood of RT #1 [1767408, 1773893] SbcB dacD RVT-GII PRK10016 YccC Neighborhood of RT #2 [2038609, 2046398] Rve PinE RVT-GII RVT-GII PRK10276 umuC Neighborhood of RT #3 [2661513, 2665881] ALDH_SaliADH MhpC RVT-GII Toxin_GhoT_OrtT Neighborhood of RT #4 [3174817, 3178670] umuC PRK10276 RVT-GII Neighborhood of RT #5 [3554205, 3559115] DinI RVT-GII Phage_GPA Neighborhood of RT #6 [3563849, 3566804] RVT-GII int Neighborhood of RT #7 [4006526, 4010034] PRK10276 PRK10276 RVT-GII Laminin_G_3 Feature: gene Location: 1767408-1768832 bp Feature: domain Description: SbcB Location: 1767414-1768830 bp Feature: domain Description: SbcB Location: 1 76741 4-1 768830 bp Feature: gene Location: 1769007-1770176 bp Feature: domain Description: dacD Location: 1769016-1770171 bp Feature: domain Description: dacD Location: 1 76901 6-1 7701 71 bp Feature: gene Location: 1770694-1772181 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1771099-1771789 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 771 099-1 771 789 bp Feature: gene Location: 1772263-1772736 bp Feature: domain Description: PRK10016 Location: 1772266-1772725 bp Feature: domain Description: PRK1 001 6 Location: 1 772266-1 772725 bp Feature: gene Location: 1772820-1773893 bp Feature: domain Description: YccC Location: 1772841-1773879 bp Feature: domain Description: YccC Location: 1 772841 -1 773879 bp Feature: gene Location: 2038609-2039325 bp Feature: domain Description: Rve Location: 2038624-2039269 bp Feature: domain Description: Rve Location: 2038624-2039269 bp Feature: gene Location: 2039331-2039840 bp Feature: domain Description: PinE Location: 2039379-2039832 bp Feature: domain Description: PinE Location: 2039379-2039832 bp Feature: gene Location: 2041235-2042722 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2041640-2042330 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2041 640-2042330 bp Feature: gene Location: 2043145-2044632 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2043550-2044240 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2043550-2044240 bp Feature: gene Location: 2044712-2045131 bp Feature: domain Description: PRK10276 Location: 2044715-2045126 bp Feature: domain Description: PRK1 0276 Location: 204471 5-20451 26 bp Feature: gene Location: 2045133-2046398 bp Feature: domain Description: umuC Location: 2045136-2046396 bp Feature: domain Description: umuC Location: 20451 36-2046396 bp Feature: gene Location: 2661513-2662946 bp Feature: domain Description: ALDH_SaliADH Location: 2661648-2662917 bp Feature: domain Description: ALDH_SaliADH Location: 2661 648-266291 7 bp Feature: gene Location: 2662960-2663709 bp Feature: domain Description: MhpC Location: 2662972-2663701 bp Feature: domain Description: MhpC Location: 2662972-2663701 bp Feature: gene Location: 2663791-2665275 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2664193-2664883 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26641 93-2664883 bp Feature: gene Location: 2665284-2665451 bp Feature: gene Location: 2665708-2665881 bp Feature: domain Description: Toxin_GhoT_OrtT Location: 2665720-2665879 bp Feature: domain Description: Toxin_GhoT_OrtT Location: 2665720-2665879 bp Feature: gene Location: 3174817-3176082 bp Feature: domain Description: umuC Location: 3174820-3176080 bp Feature: domain Description: umuC Location: 31 74820-31 76080 bp Feature: gene Location: 3176085-3176504 bp Feature: domain Description: PRK10276 Location: 3176088-3176499 bp Feature: domain Description: PRK1 0276 Location: 31 76088-31 76499 bp Feature: gene Location: 3176583-3178067 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3176985-3177675 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31 76985-31 77675 bp Feature: gene Location: 3178076-3178243 bp Feature: gene Location: 3178524-3178670 bp Feature: gene Location: 3554205-3554438 bp Feature: domain Description: DinI Location: 3554247-3554433 bp Feature: domain Description: DinI Location: 3554247-3554433 bp Feature: gene Location: 3554449-3554637 bp Feature: gene Location: 3554738-3556222 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3555140-3555830 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 35551 40-3555830 bp Feature: gene Location: 3556231-3556398 bp Feature: gene Location: 3556701-3559115 bp Feature: domain Description: Phage_GPA Location: 3557265-3558231 bp Feature: domain Description: Phage_GPA Location: 3557265-3558231 bp Feature: gene Location: 3563849-3565333 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3564251-3564941 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3564251 -3564941 bp Feature: gene Location: 3565342-3565509 bp Feature: gene Location: 3565752-3566804 bp Feature: domain Description: int Location: 3565755-3566754 bp Feature: domain Description: int Location: 3565755-3566754 bp Feature: gene Location: 4006526-4006843 bp Feature: domain Description: PRK10276 Location: 4006532-4006646 bp Feature: domain Description: PRK1 0276 Location: 4006532-4006646 bp Feature: domain Description: PRK10276 Location: 4006673-4006742 bp Feature: domain Description: PRK1 0276 Location: 4006673-4006742 bp Feature: gene Location: 4006891-4007070 bp Feature: gene Location: 4007160-4008644 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4007562-4008252 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4007562-4008252 bp Feature: gene Location: 4008653-4008820 bp Feature: gene Location: 4009303-4010034 bp Feature: domain Description: Laminin_G_3 Location: 4009624-4009978 bp Feature: domain Description: Laminin_G_3 Location: 4009624-4009978 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SbcB (COG2925), dacD (PRK11397), RVT-GII, PRK10016 (DNA gyrase inhibitor SbmC), YccC (COG1289), Rve (COG3316), PinE (COG1961), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609), ALDH_SaliADH (cd07105)
MhpC (COG0596), Toxin_GhoT_OrtT (pfam10753), DinI (pfam06183), Phage_GPA (pfam05840), int (PHA02601), Laminin_G_3 (pfam13385)

Seq: JAATHM010000002.1 Klebsiella pneumoniae strain KLP00221, whole genome shotgun sequence (242282 bp)
Overview 1 RT 1: 231909-235157 bp Neighborhood of RT #1 [231909, 235171] RVT-GII PRK10276 Feature: gene Location: 231909-232130 bp Feature: gene Location: 232392-232622 bp Feature: gene Location: 232856-234343 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 233261-233951 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 332 61-2 33951 bp Feature: gene Location: 234349-234516 bp Feature: gene Location: 234746-235171 bp Feature: domain Description: PRK10276 Location: 234749-235157 bp Feature: domain Description: PRK102 76 Location: 2 34749-2 35157 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)