myRT

myRT report for GCA_012952505.1_ASM1295250v1

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Seq: JAATID010000003.1 Klebsiella pneumoniae strain KLP00155 1, whole genome shotgun sequence (5556432 bp)
Overview 1 RT 1: 1100177-1104030 bp 2 RT 2: 1487115-1490020 bp 3 RT 3: 1928594-1932046 bp 4 RT 4: 5086912-5093383 bp 5 RT 5: 5499688-5505562 bp Neighborhood of RT #1 [1100177, 1104030] umuC PRK10276 RVT-GII Neighborhood of RT #2 [1487115, 1490070] RVT-GII int Neighborhood of RT #3 [1928594, 1932102] PRK10276 PRK10276 RVT-GII Laminin_G_3 Neighborhood of RT #4 [5086912, 5093397] SbcB dacD RVT-GII PRK10016 YccC Neighborhood of RT #5 [5499688, 5505564] Rve PinE RVT-GII PRK10276 umuC Feature: gene Location: 1100177-1101442 bp Feature: domain Description: umuC Location: 1100180-1101440 bp Feature: domain Description: umuC Location: 1 1 001 80-1 1 01 440 bp Feature: gene Location: 1101445-1101864 bp Feature: domain Description: PRK10276 Location: 1101448-1101859 bp Feature: domain Description: PRK1 0276 Location: 1 1 01 448-1 1 01 859 bp Feature: gene Location: 1101943-1103427 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1102345-1103035 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 02345-1 1 03035 bp Feature: gene Location: 1103436-1103603 bp Feature: gene Location: 1103884-1104030 bp Feature: gene Location: 1487115-1488599 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1487517-1488207 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 48751 7-1 488207 bp Feature: gene Location: 1488608-1488775 bp Feature: gene Location: 1489018-1490070 bp Feature: domain Description: int Location: 1489021-1490020 bp Feature: domain Description: int Location: 1 489021 -1 490020 bp Feature: gene Location: 1928594-1928911 bp Feature: domain Description: PRK10276 Location: 1928600-1928714 bp Feature: domain Description: PRK1 0276 Location: 1 928600-1 92871 4 bp Feature: domain Description: PRK10276 Location: 1928741-1928810 bp Feature: domain Description: PRK1 0276 Location: 1 928741 -1 92881 0 bp Feature: gene Location: 1928959-1929138 bp Feature: gene Location: 1929228-1930712 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1929630-1930320 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 929630-1 930320 bp Feature: gene Location: 1930721-1930888 bp Feature: gene Location: 1931371-1932102 bp Feature: domain Description: Laminin_G_3 Location: 1931692-1932046 bp Feature: domain Description: Laminin_G_3 Location: 1 931 692-1 932046 bp Feature: gene Location: 5086912-5088336 bp Feature: domain Description: SbcB Location: 5086918-5088334 bp Feature: domain Description: SbcB Location: 508691 8-5088334 bp Feature: gene Location: 5088511-5089680 bp Feature: domain Description: dacD Location: 5088520-5089675 bp Feature: domain Description: dacD Location: 5088520-5089675 bp Feature: gene Location: 5090198-5091685 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5090603-5091293 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5090603-5091 293 bp Feature: gene Location: 5091767-5092240 bp Feature: domain Description: PRK10016 Location: 5091770-5092229 bp Feature: domain Description: PRK1 001 6 Location: 5091 770-5092229 bp Feature: gene Location: 5092324-5093397 bp Feature: domain Description: YccC Location: 5092345-5093383 bp Feature: domain Description: YccC Location: 5092345-5093383 bp Feature: gene Location: 5499688-5500395 bp Feature: domain Description: Rve Location: 5499703-5500345 bp Feature: domain Description: Rve Location: 5499703-5500345 bp Feature: gene Location: 5500408-5500917 bp Feature: domain Description: PinE Location: 5500456-5500909 bp Feature: domain Description: PinE Location: 5500456-5500909 bp Feature: gene Location: 5502311-5503798 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5502716-5503406 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 550271 6-5503406 bp Feature: gene Location: 5503878-5504297 bp Feature: domain Description: PRK10276 Location: 5503881-5504292 bp Feature: domain Description: PRK1 0276 Location: 5503881 -5504292 bp Feature: gene Location: 5504299-5505564 bp Feature: domain Description: umuC Location: 5504302-5505562 bp Feature: domain Description: umuC Location: 5504302-5505562 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, int (PHA02601), Laminin_G_3 (pfam13385), SbcB (COG2925), dacD (PRK11397), PRK10016 (DNA gyrase inhibitor SbmC), YccC (COG1289), Rve (COG3316)
PinE (COG1961)

Seq: JAATID010000005.1 Klebsiella pneumoniae strain KLP00155 2, whole genome shotgun sequence (172196 bp)
Overview 1 RT 1: 1031-4279 bp Neighborhood of RT #1 [1031, 4293] RVT-GII PRK10276 Feature: gene Location: 1031-1252 bp Feature: gene Location: 1514-1744 bp Feature: gene Location: 1978-3465 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2383-3073 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 383-3073 bp Feature: gene Location: 3471-3638 bp Feature: gene Location: 3868-4293 bp Feature: domain Description: PRK10276 Location: 3871-4279 bp Feature: domain Description: PRK102 76 Location: 3871-42 79 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)

Seq: JAATID010000004.1 Klebsiella pneumoniae strain KLP00155 3, whole genome shotgun sequence (96242 bp)
Overview 1 RT 1: 23401-28753 bp Neighborhood of RT #1 [23401, 28890] umuC PRK10276 RVT-GII StbA Plasmid_stab_B Plasmid_stab_B Feature: gene Location: 23401-24672 bp Feature: domain Description: umuC Location: 23404-24664 bp Feature: domain Description: umuC Location: 23 404-24664 bp Feature: gene Location: 24672-25379 bp Feature: domain Description: PRK10276 Location: 24996-25362 bp Feature: domain Description: PRK10276 Location: 24996-253 62 bp Feature: gene Location: 25509-26996 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25914-26604 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25914-26604 bp Feature: gene Location: 27245-28216 bp Feature: domain Description: StbA Location: 27248-28193 bp Feature: domain Description: StbA Location: 27248-28193 bp Feature: gene Location: 28219-28890 bp Feature: domain Description: Plasmid_stab_B Location: 28234-28441 bp Feature: domain Description: Plasmid_stab_B Location: 2823 4-28441 bp Feature: domain Description: Plasmid_stab_B Location: 28546-28753 bp Feature: domain Description: Plasmid_stab_B Location: 28546-28753 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, StbA (pfam06406), Plasmid_stab_B (pfam10784)

Seq: JAATID010000002.1 Klebsiella pneumoniae strain KLP00155 4, whole genome shotgun sequence (45730 bp)
Overview 1 RT 1: 18450-22885 bp Neighborhood of RT #1 [18450, 22893] DDE_Tnp_IS1 InsA RVT-GII PRK10276 umuC Feature: gene Location: 18450-18827 bp Feature: domain Description: DDE_Tnp_IS1 Location: 18453-18825 bp Feature: domain Description: DDE_Tnp_IS1 Location: 184 53-18825 bp Feature: gene Location: 18847-19146 bp Feature: domain Description: InsA Location: 18850-19102 bp Feature: domain Description: InsA Location: 18850-19102 bp Feature: gene Location: 19298-20785 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19703-20393 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19703-20393 bp Feature: gene Location: 20939-21622 bp Feature: domain Description: PRK10276 Location: 21242-21605 bp Feature: domain Description: PRK10276 Location: 2124 2-21605 bp Feature: gene Location: 21622-22893 bp Feature: domain Description: umuC Location: 21625-22885 bp Feature: domain Description: umuC Location: 21625-22885 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_IS1 (pfam03400), InsA (COG3677), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609)