myRT

myRT report for GCA_012952515.1_ASM1295251v1

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Seq: JAATHT010000001.1 Klebsiella pneumoniae strain KLP00149, whole genome shotgun sequence (5492154 bp)
Overview 1 RT 1: 1846077-1852548 bp 2 RT 2: 3328032-3331885 bp 3 RT 3: 3672131-3675036 bp 4 RT 4: 4113607-4117059 bp Neighborhood of RT #1 [1846077, 1852562] SbcB dacD RVT-GII PRK10016 YccC Neighborhood of RT #2 [3328032, 3331885] umuC PRK10276 RVT-GII Neighborhood of RT #3 [3672131, 3675086] RVT-GII int Neighborhood of RT #4 [4113607, 4117115] PRK10276 PRK10276 RVT-GII Laminin_G_3 Feature: gene Location: 1846077-1847501 bp Feature: domain Description: SbcB Location: 1846083-1847499 bp Feature: domain Description: SbcB Location: 1 846083-1 847499 bp Feature: gene Location: 1847676-1848845 bp Feature: domain Description: dacD Location: 1847685-1848840 bp Feature: domain Description: dacD Location: 1 847685-1 848840 bp Feature: gene Location: 1849363-1850850 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1849768-1850458 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 849768-1 850458 bp Feature: gene Location: 1850932-1851405 bp Feature: domain Description: PRK10016 Location: 1850935-1851394 bp Feature: domain Description: PRK1 001 6 Location: 1 850935-1 851 394 bp Feature: gene Location: 1851489-1852562 bp Feature: domain Description: YccC Location: 1851510-1852548 bp Feature: domain Description: YccC Location: 1 851 51 0-1 852548 bp Feature: gene Location: 3328032-3329297 bp Feature: domain Description: umuC Location: 3328035-3329295 bp Feature: domain Description: umuC Location: 3328035-3329295 bp Feature: gene Location: 3329300-3329719 bp Feature: domain Description: PRK10276 Location: 3329303-3329714 bp Feature: domain Description: PRK1 0276 Location: 3329303-332971 4 bp Feature: gene Location: 3329798-3331282 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3330200-3330890 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3330200-3330890 bp Feature: gene Location: 3331291-3331458 bp Feature: gene Location: 3331739-3331885 bp Feature: gene Location: 3672131-3673615 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3672533-3673223 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3672533-3673223 bp Feature: gene Location: 3673624-3673791 bp Feature: gene Location: 3674034-3675086 bp Feature: domain Description: int Location: 3674037-3675036 bp Feature: domain Description: int Location: 3674037-3675036 bp Feature: gene Location: 4113607-4113924 bp Feature: domain Description: PRK10276 Location: 4113613-4113727 bp Feature: domain Description: PRK1 0276 Location: 41 1 361 3-41 1 3727 bp Feature: domain Description: PRK10276 Location: 4113754-4113823 bp Feature: domain Description: PRK1 0276 Location: 41 1 3754-41 1 3823 bp Feature: gene Location: 4113972-4114151 bp Feature: gene Location: 4114241-4115725 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4114643-4115333 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41 1 4643-41 1 5333 bp Feature: gene Location: 4115734-4115901 bp Feature: gene Location: 4116384-4117115 bp Feature: domain Description: Laminin_G_3 Location: 4116705-4117059 bp Feature: domain Description: Laminin_G_3 Location: 41 1 6705-41 1 7059 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SbcB (COG2925), dacD (PRK11397), RVT-GII, PRK10016 (DNA gyrase inhibitor SbmC), YccC (COG1289), umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), int (PHA02601), Laminin_G_3 (pfam13385)