myRT

myRT report for GCA_012961145.1_ASM1296114v1

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Seq: DTZY01000243.1 TPA_asm: Gammaproteobacteria bacterium isolate UWMA-0260 NODE_21551_length_4939_cov_0.747314, whole genome shotgun sequence (4939 bp)
Overview 1 RT 1: 2025-4685 bp Neighborhood of RT #1 [2025, 4849] PRK08213 RVT-GII GIIM Feature: gene Location: 2025-2807 bp Feature: domain Description: PRK08213 Location: 2028-2805 bp Feature: domain Description: PRK0821 3 Location: 2028-2805 bp Feature: gene Location: 3141-3476 bp Feature: gene Location: 3581-4849 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3797-4412 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3797-441 2 bp Feature: domain Description: GIIM Note: maturase Location: 4460-4685 bp Feature: domain Description: GIIM Note: maturase Location: 4460-4685 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK08213 (gluconate 5-dehydrogenase; Provisional), RVT-GII, GIIM (pfam08388)

Seq: DTZY01000390.1 TPA_asm: Gammaproteobacteria bacterium isolate UWMA-0260 NODE_43753_length_2894_cov_0.743113, whole genome shotgun sequence (2894 bp)
Overview 1 RT 1: 2-2275 bp Neighborhood of RT #1 [2, 2415] NIPSNAP PQQ_2 PQQ_2 RVT-GII Feature: gene Location: 2-229 bp Feature: domain Description: NIPSNAP Location: 8-200 bp Feature: domain Description: NIPSNAP Location: 8-2 00 bp Feature: gene Location: 266-1675 bp Feature: domain Description: PQQ_2 Location: 563-698 bp Feature: domain Description: PQQ_2 Location: 563-698 bp Feature: domain Description: PQQ_2 Location: 758-1412 bp Feature: domain Description: PQQ_2 Location: 758-1412 bp Feature: gene Location: 1828-2415 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2050-2275 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 050-2 2 75 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT NIPSNAP (pfam07978), PQQ_2 (pfam13360), RVT-GII

Seq: DTZY01000607.1 TPA_asm: Gammaproteobacteria bacterium isolate UWMA-0260 NODE_98745_length_1574_cov_0.181695, whole genome shotgun sequence (1574 bp)
Overview 1 RT 1: 3-1573 bp Neighborhood of RT #1 [3, 1573] RVT-UG4 Feature: gene Location: 3-257 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 15-252 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 15-252 bp Feature: gene Location: 1295-1573 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG4