myRT

myRT report for GCA_012962225.1_ASM1296222v1

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Seq: DTXW01000049.1 TPA_asm: Ghiorsea sp. isolate UWMA-0204 k99_1228093, whole genome shotgun sequence (1524 bp)
Overview 1 RT 1: 212-1274 bp Neighborhood of RT #1 [212, 1465] RVT-GII GIIM Feature: gene Location: 212-1465 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 410-1022 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41 0-1 022 bp Feature: domain Description: GIIM Note: maturase Location: 1067-1274 bp Feature: domain Description: GIIM Note: maturase Location: 1 067-1 274 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: DTXW01000535.1 TPA_asm: Ghiorsea sp. isolate UWMA-0204 k99_555239, whole genome shotgun sequence (4107 bp)
Overview 1 RT 1: 3-3923 bp Neighborhood of RT #1 [3, 3961] Csx1_III-U CRISPR_Cas6 RVT-CRISPR Cas1_I-II-III Feature: gene Location: 3-959 bp Feature: domain Description: Csx1_III-U Location: 594-888 bp Feature: domain Description: Csx1_III-U Location: 594-888 bp Feature: gene Location: 962-3961 bp Feature: domain Description: CRISPR_Cas6 Location: 1505-1814 bp Feature: domain Description: CRISPR_Cas6 Location: 1505-1814 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 2081-2684 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 2 081-2 684 bp Feature: domain Description: Cas1_I-II-III Location: 2981-3923 bp Feature: domain Description: Cas1_I-II-III Location: 2 981-392 3 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Csx1_III-U (cl21570), CRISPR_Cas6 (pfam10040), RVT-CRISPR, Cas1_I-II-III (cl00656)