myRT

myRT report for GCA_012965515.1_ASM1296551v1

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Seq: DTSE01000374.1 TPA_asm: Candidatus Melainabacteria bacterium isolate UWMA-0043 NODE_5222_length_8879_cov_0.148861, whole genome shotgun sequence (8879 bp)
Overview 1 RT 1: 5060-8831 bp Neighborhood of RT #1 [5060, 8831] zf-IS66 DDE_Tnp_IS66 DDE_Tnp_IS66_C TnpB_IS66 RVT_N RVT-GII GIIM Feature: gene Location: 5060-6613 bp Feature: domain Description: zf-IS66 Location: 5444-5570 bp Feature: domain Description: zf-IS66 Location: 5444-5570 bp Feature: domain Description: DDE_Tnp_IS66 Location: 5618-6455 bp Feature: domain Description: DDE_Tnp_IS66 Location: 561 8-6455 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 6476-6584 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 6476-6584 bp Feature: gene Location: 6757-7080 bp Feature: domain Description: TnpB_IS66 Location: 6832-6970 bp Feature: domain Description: TnpB_IS66 Location: 6832-6970 bp Feature: gene Location: 7086-8573 bp Feature: RT Description: RVT_N Location: 7143-7386 bp Feature: RT Description: RVT_N Location: 71 43-7386 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7437-8046 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7437-8046 bp Feature: domain Description: GIIM Note: maturase Location: 8109-8331 bp Feature: domain Description: GIIM Note: maturase Location: 81 09-8331 bp Feature: gene Location: 8592-8831 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT zf-IS66 (pfam13005), DDE_Tnp_IS66 (pfam03050), DDE_Tnp_IS66_C (pfam13817), TnpB_IS66 (pfam05717), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)