myRT

myRT report for GCA_012970285.1_ASM1297028v1

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Seq: JIBW01000011.1 Bacillaceae bacterium JMAK1 plasmid pGIAK2 Contig12, whole genome shotgun sequence (226229 bp)
Overview 1 RT 1: 89035-97681 bp Neighborhood of RT #1 [89035, 97681] ComEC MltB NlpD RVT-GII Intron_maturas2 HNHc Feature: gene Location: 89035-90129 bp Feature: domain Description: ComEC Location: 89233-89737 bp Feature: domain Description: ComEC Location: 89233-89737 bp Feature: gene Location: 90151-91512 bp Feature: domain Description: MltB Location: 90238-90358 bp Feature: domain Description: MltB Location: 90238-90358 bp Feature: domain Description: NlpD Location: 90973-91462 bp Feature: domain Description: NlpD Location: 90973-91 462 bp Feature: gene Location: 91619-93442 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 91883-92714 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 91 883-9271 4 bp Feature: domain Description: Intron_maturas2 Location: 92873-93089 bp Feature: domain Description: Intron_maturas2 Location: 92873-93089 bp Feature: domain Description: HNHc Note: nucleases Location: 93257-93413 bp Feature: domain Description: HNHc Note: nucleases Location: 93257-9341 3 bp Feature: gene Location: 94021-94860 bp Feature: gene Location: 94919-97681 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ComEC (COG2333), MltB (TIGR02282), NlpD (COG0739), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: JIBW01000002.1 Bacillaceae bacterium JMAK1 contig2, whole genome shotgun sequence (1373524 bp)
Overview 1 RT 1: 675678-679770 bp Neighborhood of RT #1 [675678, 679781] RecB HelD RVT-Retrons INT_tnpA_C_Tn554 INT_ICEBs1_C_like Feature: gene Location: 675678-676613 bp Feature: domain Description: RecB Location: 675954-676329 bp Feature: domain Description: RecB Location: 675954-67632 9 bp Feature: domain Description: HelD Location: 676452-676602 bp Feature: domain Description: HelD Location: 676452 -676602 bp Feature: gene Location: 677095-677991 bp Feature: gene Location: 678132-679139 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 678306-678861 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 678306-678861 bp Feature: gene Location: 679190-679345 bp Feature: domain Description: INT_tnpA_C_Tn554 Location: 679196-679283 bp Feature: domain Description: INT_tnpA_C_Tn554 Location: 679196-6792 83 bp Feature: gene Location: 679488-679781 bp Feature: domain Description: INT_ICEBs1_C_like Location: 679497-679770 bp Feature: domain Description: INT_ICEBs1_C_like Location: 679497-679770 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RecB (COG4998), HelD (COG3973), RVT-Retrons, INT_tnpA_C_Tn554 (cd01186), INT_ICEBs1_C_like (cd01189)