myRT

myRT report for GCA_012972825.1_ASM1297282v1

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Seq: JABDHL010000010.1 Chlorobiaceae bacterium isolate Oct13_Bin_1 GSB_B_Oct13_Bin_1_000000000010, whole genome shotgun sequence (90530 bp)
Overview 1 RT 1: 45620-49030 bp Neighborhood of RT #1 [45620, 49030] RVT-DGRs Feature: gene Location: 45620-45877 bp Feature: gene Location: 45910-46215 bp Feature: gene Location: 46202-47155 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 46412-47003 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 4641 2-47003 bp Feature: gene Location: 47428-48702 bp Feature: gene Location: 48704-49030 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs

Seq: JABDHL010000017.1 Chlorobiaceae bacterium isolate Oct13_Bin_1 GSB_B_Oct13_Bin_1_000000000017, whole genome shotgun sequence (4823 bp)
Overview 1 RT 1: 245-4235 bp Neighborhood of RT #1 [245, 4235] PAS PAS TMAO_torS RVT-GII Feature: gene Location: 245-2299 bp Feature: domain Description: PAS Location: 359-698 bp Feature: domain Description: PAS Location: 359-698 bp Feature: domain Description: PAS Location: 917-1184 bp Feature: domain Description: PAS Location: 917-1184 bp Feature: domain Description: TMAO_torS Location: 1196-2282 bp Feature: domain Description: TMAO_torS Location: 1196-2 2 82 bp Feature: gene Location: 2741-3472 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3176-3377 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3176-3377 bp Feature: gene Location: 3720-4235 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PAS (smart00091), TMAO_torS (TIGR02956), RVT-GII

Seq: JABDHL010000020.1 Chlorobiaceae bacterium isolate Oct13_Bin_1 GSB_B_Oct13_Bin_1_000000000020, whole genome shotgun sequence (10115 bp)
Overview 1 RT 1: 5756-10113 bp Neighborhood of RT #1 [5756, 10113] Dcm Vsr RVT_N RVT-GII GIIM Feature: gene Location: 5756-6781 bp Feature: domain Description: Dcm Location: 5771-6761 bp Feature: domain Description: Dcm Location: 5771-6761 bp Feature: gene Location: 6813-7190 bp Feature: domain Description: Vsr Location: 6816-7176 bp Feature: domain Description: Vsr Location: 6816-7176 bp Feature: gene Location: 7760-9202 bp Feature: RT Description: RVT_N Location: 7805-8048 bp Feature: RT Description: RVT_N Location: 7805-8048 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8093-8729 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8093 -8729 bp Feature: domain Description: GIIM Note: maturase Location: 8780-9014 bp Feature: domain Description: GIIM Note: maturase Location: 8780-9014 bp Feature: gene Location: 9461-9808 bp Feature: gene Location: 9859-10113 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Dcm (COG0270), Vsr (pfam03852), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: JABDHL010000079.1 Chlorobiaceae bacterium isolate Oct13_Bin_1 GSB_B_Oct13_Bin_1_000000000079, whole genome shotgun sequence (10174 bp)
Overview 1 RT 1: 2054-9979 bp Neighborhood of RT #1 [2054, 10089] MPP_1 COG5635 pfam03781 HRDC RVT-DGRs YfmG MPP_GpdQ YfcE COG5635 Feature: gene Location: 2054-5593 bp Feature: domain Description: MPP_1 Location: 2072-2810 bp Feature: domain Description: MPP_1 Location: 2072-2810 bp Feature: domain Description: COG5635 Location: 3308-4463 bp Feature: domain Description: COG5635 Location: 3308-4 4 63 bp Feature: domain Description: pfam03781 Location: 4832-5582 bp Feature: domain Description: pfam03781 Location: 4 832-5582 bp Feature: gene Location: 5803-6261 bp Feature: domain Description: HRDC Location: 6037-6220 bp Feature: domain Description: HRDC Location: 6037-6220 bp Feature: gene Location: 6236-7240 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 6446-7028 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 64 4 6-7028 bp Feature: gene Location: 7254-7388 bp Feature: domain Description: YfmG Location: 7260-7380 bp Feature: domain Description: YfmG Location: 7260-7380 bp Feature: gene Location: 7741-10089 bp Feature: domain Description: MPP_GpdQ Location: 7858-8182 bp Feature: domain Description: MPP_GpdQ Location: 7858-8182 bp Feature: domain Description: YfcE Location: 8434-8617 bp Feature: domain Description: YfcE Location: 84 34 -8617 bp Feature: domain Description: COG5635 Location: 9082-9979 bp Feature: domain Description: COG5635 Location: 9082-9979 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MPP_1 (cd07400), COG5635 (Predicted NTPase, NACHT family domain ), pfam03781 (FGE-sulfatase;Sulfatase-modifying factor enzyme 1), HRDC (smart00341), RVT-DGRs, YfmG (COG1262), MPP_GpdQ (cd07402), YfcE (COG0622)

Seq: JABDHL010000085.1 Chlorobiaceae bacterium isolate Oct13_Bin_1 GSB_B_Oct13_Bin_1_000000000085, whole genome shotgun sequence (5199 bp)
Overview 1 RT 1: 538-4082 bp Neighborhood of RT #1 [538, 4117] RVT-GII GIIM CHS_like Feature: gene Location: 538-717 bp Feature: gene Location: 752-1003 bp Feature: gene Location: 1146-1979 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1152-1467 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 115 2-1467 bp Feature: domain Description: GIIM Note: maturase Location: 1521-1752 bp Feature: domain Description: GIIM Note: maturase Location: 15 21-175 2 bp Feature: gene Location: 1990-2274 bp Feature: gene Location: 2867-4117 bp Feature: domain Description: CHS_like Location: 3320-4082 bp Feature: domain Description: CHS_like Location: 3320-4082 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), CHS_like (cd00831)