myRT

myRT report for GCA_012976275.1_ASM1297627v1

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Seq: JABDSF010000111.1 Bacteroides vulgatus strain VPI-4025 scaffold1.1-refined, whole genome shotgun sequence (511001 bp)
Overview 1 RT 1: 6932-12672 bp Neighborhood of RT #1 [6932, 12893] PRK07983 PRK07983 RVT-GII OMP_RagA_SusC SusD Feature: gene Location: 6932-7585 bp Feature: domain Description: PRK07983 Location: 7283-7367 bp Feature: domain Description: PRK07983 Location: 7283-7367 bp Feature: domain Description: PRK07983 Location: 7454-7544 bp Feature: domain Description: PRK07983 Location: 7454-7544 bp Feature: gene Location: 7603-8172 bp Feature: gene Location: 8476-9681 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8662-9325 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8662-9325 bp Feature: gene Location: 9836-11398 bp Feature: domain Description: OMP_RagA_SusC Location: 9863-11390 bp Feature: domain Description: OMP_RagA_SusC Location: 9863-1 1 390 bp Feature: gene Location: 11409-12893 bp Feature: domain Description: SusD Location: 11691-12672 bp Feature: domain Description: SusD Location: 1 1 691 -1 2672 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SusD (NF033071), PRK07983 (exodeoxyribonuclease X; Provisional), RVT-GII, OMP_RagA_SusC (TIGR04056)

Seq: JABDSF010000032.1 Bacteroides vulgatus strain VPI-4025 scaffold89.1-refined, whole genome shotgun sequence (11920 bp)
Overview 1 RT 1: 5629-11914 bp Neighborhood of RT #1 [5629, 11919] YWFCY T4SS-DNA_transf RVT-GII Intron_maturas2 HNHc TraG-D_C AtoC Feature: gene Location: 5629-6639 bp Feature: domain Description: YWFCY Location: 5635-5812 bp Feature: domain Description: YWFCY Location: 5635-5812 bp Feature: domain Description: T4SS-DNA_transf Location: 6103-6610 bp Feature: domain Description: T4SS-DNA_transf Location: 6103-6610 bp Feature: gene Location: 6667-7182 bp Feature: gene Location: 7184-8989 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7448-8270 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7448-82 70 bp Feature: domain Description: Intron_maturas2 Location: 8348-8678 bp Feature: domain Description: Intron_maturas2 Location: 8348-8678 bp Feature: domain Description: HNHc Note: nucleases Location: 8822-8966 bp Feature: domain Description: HNHc Note: nucleases Location: 882 2 -8966 bp Feature: gene Location: 8976-10154 bp Feature: domain Description: TraG-D_C Location: 9501-9834 bp Feature: domain Description: TraG-D_C Location: 9501-9834 bp Feature: gene Location: 10726-11919 bp Feature: domain Description: AtoC Location: 10756-11914 bp Feature: domain Description: AtoC Location: 10756-11914 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AtoC (COG2204), YWFCY (pfam14293), T4SS-DNA_transf (pfam02534), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), TraG-D_C (pfam12696)