myRT

myRT report for GCA_012978835.1_ASM1297883v1

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Seq: LIWS01000003.1 Campylobacter sp. RM16190 contig00003, whole genome shotgun sequence (268952 bp)
Overview 1 RT 1: 37337-43987 bp Neighborhood of RT #1 [37337, 43992] pyrB pyrC RVT-Retrons TIGR00729 M20_Acy1_IAAspH BglX Feature: gene Location: 37337-38266 bp Feature: domain Description: pyrB Location: 37346-38255 bp Feature: domain Description: pyrB Location: 37346-38255 bp Feature: gene Location: 38266-39546 bp Feature: domain Description: pyrC Location: 38269-39523 bp Feature: domain Description: pyrC Location: 38269-39523 bp Feature: gene Location: 39681-41399 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 39849-40386 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 39849-40386 bp Feature: domain Description: TIGR00729 Location: 40596-40800 bp Feature: domain Description: TIGR00729 Location: 40596-40800 bp Feature: gene Location: 41474-42793 bp Feature: domain Description: M20_Acy1_IAAspH Location: 41516-42761 bp Feature: domain Description: M20_Acy1 _IAAspH Location: 41 51 6-42761 bp Feature: gene Location: 42931-43992 bp Feature: domain Description: BglX Location: 43006-43987 bp Feature: domain Description: BglX Location: 43006-43987 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT pyrB (PRK13814), pyrC (PRK09357), RVT-Retrons, TIGR00729 (ribonuclease H, mammalian HI/archaeal HII subfamily), M20_Acy1_IAAspH (cd05665), BglX (COG1472)

Seq: LIWS01000005.1 Campylobacter sp. RM16190 contig00005, whole genome shotgun sequence (125995 bp)
Overview 1 RT 1: 1894-8988 bp Neighborhood of RT #1 [1894, 8988] RVT-CRISPR Cas1_I-II-III Cas6_III Feature: gene Location: 1894-2232 bp Feature: gene Location: 2261-2440 bp Feature: gene Location: 3350-5578 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 3578-4184 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 3578-4184 bp Feature: domain Description: Cas1_I-II-III Location: 4619-5537 bp Feature: domain Description: Cas1_I-II-III Location: 4619-5537 bp Feature: gene Location: 5585-6397 bp Feature: domain Description: Cas6_III Location: 5642-6386 bp Feature: domain Description: Cas6_III Location: 5642 -6386 bp Feature: gene Location: 7471-8988 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR, Cas1_I-II-III (cl00656), Cas6_III (cd09760)