myRT

myRT report for GCA_012985225.1_ASM1298522v1

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Seq: JABEKZ010000137.1 Corallococcus exiguus strain AB031 NODE_137_length_25178_cov_28.9894, whole genome shotgun sequence (25178 bp)
Overview 1 RT 1: 6007-18917 bp Neighborhood of RT #1 [6007, 18934] WD40 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 SWIM RVT-Retrons DAP2 BetA BetA BetA Feature: gene Location: 6007-12540 bp Feature: domain Description: WD40 Location: 6037-6922 bp Feature: domain Description: WD40 Location: 6037-6922 bp Feature: domain Description: HEAT_2 Location: 7090-7264 bp Feature: domain Description: HEAT_2 Location: 7090-7264 bp Feature: domain Description: HEAT_2 Location: 7846-8095 bp Feature: domain Description: HEAT_2 Location: 7846-8095 bp Feature: domain Description: HEAT_2 Location: 8137-8341 bp Feature: domain Description: HEAT_2 Location: 81 37-8341 bp Feature: domain Description: HEAT_2 Location: 8941-9157 bp Feature: domain Description: HEAT_2 Location: 8941 -91 57 bp Feature: domain Description: HEAT_2 Location: 9271-9412 bp Feature: domain Description: HEAT_2 Location: 9271 -941 2 bp Feature: domain Description: HEAT_2 Location: 9877-10036 bp Feature: domain Description: HEAT_2 Location: 9877-1 0036 bp Feature: domain Description: HEAT_2 Location: 10060-10270 bp Feature: domain Description: HEAT_2 Location: 1 0060-1 0270 bp Feature: domain Description: HEAT_2 Location: 10321-10537 bp Feature: domain Description: HEAT_2 Location: 1 0321 -1 0537 bp Feature: domain Description: HEAT_2 Location: 10762-10972 bp Feature: domain Description: HEAT_2 Location: 1 0762-1 0972 bp Feature: domain Description: HEAT_2 Location: 11290-11527 bp Feature: domain Description: HEAT_2 Location: 1 1 290-1 1 527 bp Feature: domain Description: HEAT_2 Location: 12031-12184 bp Feature: domain Description: HEAT_2 Location: 1 2031 -1 21 84 bp Feature: domain Description: HEAT_2 Location: 12322-12475 bp Feature: domain Description: HEAT_2 Location: 1 2322-1 2475 bp Feature: gene Location: 12537-14396 bp Feature: domain Description: SWIM Location: 14007-14091 bp Feature: domain Description: SWIM Location: 1 4007-1 4091 bp Feature: gene Location: 14796-16241 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 15351-15993 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 5351 -1 5993 bp Feature: gene Location: 16249-17238 bp Feature: domain Description: DAP2 Location: 16390-17128 bp Feature: domain Description: DAP2 Location: 1 6390-1 71 28 bp Feature: gene Location: 17411-18934 bp Feature: domain Description: BetA Location: 17417-17927 bp Feature: domain Description: BetA Location: 1 741 7-1 7927 bp Feature: domain Description: BetA Location: 18038-18344 bp Feature: domain Description: BetA Location: 1 8038-1 8344 bp Feature: domain Description: BetA Location: 18479-18917 bp Feature: domain Description: BetA Location: 1 8479-1 891 7 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SWIM (pfam04434), RVT-Retrons, DAP2 (COG1506), BetA (COG2303), WD40 (smart00320), HEAT_2 (pfam13646)

Seq: JABEKZ010000002.1 Corallococcus exiguus strain AB031 NODE_2_length_148752_cov_26.9647, whole genome shotgun sequence (148752 bp)
Overview 1 RT 1: 109397-114534 bp Neighborhood of RT #1 [109397, 115004] Tra5 RVT-GII GIIM COG4584 Feature: gene Location: 109397-109768 bp Feature: gene Location: 110455-111090 bp Feature: domain Description: Tra5 Location: 110497-110911 bp Feature: domain Description: Tra5 Location: 110497-110911 bp Feature: gene Location: 111159-112391 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 111357-112011 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 111357-112 011 bp Feature: domain Description: GIIM Note: maturase Location: 112095-112314 bp Feature: domain Description: GIIM Note: maturase Location: 112 095-112 314 bp Feature: gene Location: 113247-113696 bp Feature: gene Location: 113709-115004 bp Feature: domain Description: COG4584 Location: 113781-114534 bp Feature: domain Description: COG4584 Location: 113781-114534 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Tra5 (COG2801), RVT-GII, GIIM (pfam08388), COG4584 (Transposase )