myRT

myRT report for GCA_012985235.1_ASM1298523v1

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Seq: JABELB010000129.1 Corallococcus exiguus strain CA048 NODE_129_length_25189_cov_25.3983, whole genome shotgun sequence (25189 bp)
Overview 1 RT 1: 6251-19101 bp Neighborhood of RT #1 [6251, 19166] BetA BetA BetA DAP2 RVT-Retrons SWIM WD40 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 Feature: gene Location: 6251-7774 bp Feature: domain Description: BetA Location: 6257-6824 bp Feature: domain Description: BetA Location: 6257-6824 bp Feature: domain Description: BetA Location: 6878-7187 bp Feature: domain Description: BetA Location: 6878-71 87 bp Feature: domain Description: BetA Location: 7334-7757 bp Feature: domain Description: BetA Location: 7334-7757 bp Feature: gene Location: 7947-8924 bp Feature: domain Description: DAP2 Location: 8088-8826 bp Feature: domain Description: DAP2 Location: 8088-8826 bp Feature: gene Location: 8932-10377 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 9487-10129 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 9487-1 01 29 bp Feature: gene Location: 10777-12636 bp Feature: domain Description: SWIM Location: 12247-12331 bp Feature: domain Description: SWIM Location: 1 2247-1 2331 bp Feature: gene Location: 12633-19166 bp Feature: domain Description: WD40 Location: 12663-13548 bp Feature: domain Description: WD40 Location: 1 2663-1 3548 bp Feature: domain Description: HEAT_2 Location: 13662-13869 bp Feature: domain Description: HEAT_2 Location: 1 3662-1 3869 bp Feature: domain Description: HEAT_2 Location: 14472-14721 bp Feature: domain Description: HEAT_2 Location: 1 4472-1 4721 bp Feature: domain Description: HEAT_2 Location: 14763-14967 bp Feature: domain Description: HEAT_2 Location: 1 4763-1 4967 bp Feature: domain Description: HEAT_2 Location: 15144-15366 bp Feature: domain Description: HEAT_2 Location: 1 51 44-1 5366 bp Feature: domain Description: HEAT_2 Location: 15570-15783 bp Feature: domain Description: HEAT_2 Location: 1 5570-1 5783 bp Feature: domain Description: HEAT_2 Location: 15915-16038 bp Feature: domain Description: HEAT_2 Location: 1 591 5-1 6038 bp Feature: domain Description: HEAT_2 Location: 16455-16641 bp Feature: domain Description: HEAT_2 Location: 1 6455-1 6641 bp Feature: domain Description: HEAT_2 Location: 16686-16896 bp Feature: domain Description: HEAT_2 Location: 1 6686-1 6896 bp Feature: domain Description: HEAT_2 Location: 16947-17157 bp Feature: domain Description: HEAT_2 Location: 1 6947-1 71 57 bp Feature: domain Description: HEAT_2 Location: 17376-17532 bp Feature: domain Description: HEAT_2 Location: 1 7376-1 7532 bp Feature: domain Description: HEAT_2 Location: 17916-18153 bp Feature: domain Description: HEAT_2 Location: 1 791 6-1 81 53 bp Feature: domain Description: HEAT_2 Location: 18657-18810 bp Feature: domain Description: HEAT_2 Location: 1 8657-1 881 0 bp Feature: domain Description: HEAT_2 Location: 18948-19101 bp Feature: domain Description: HEAT_2 Location: 1 8948-1 91 01 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SWIM (pfam04434), WD40 (smart00320), HEAT_2 (pfam13646), BetA (COG2303), DAP2 (COG1506), RVT-Retrons

Seq: JABELB010000092.1 Corallococcus exiguus strain CA048 NODE_92_length_31056_cov_24.0651, whole genome shotgun sequence (31056 bp)
Overview 1 RT 1: 12435-14931 bp Neighborhood of RT #1 [12435, 14931] DDE_5 RVT-GII Feature: gene Location: 12435-12653 bp Feature: domain Description: DDE_5 Location: 12501-12624 bp Feature: domain Description: DDE_5 Location: 12 501-12 62 4 bp Feature: gene Location: 12693-13883 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12801-13491 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 801-13491 bp Feature: gene Location: 14190-14390 bp Feature: gene Location: 14617-14931 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_5 (pfam13546), RVT-GII