myRT

myRT report for GCA_012985305.1_ASM1298530v1

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Seq: JAAQWD010000037.1 Pseudomonas veronii strain WS 5113 37_44341_15.8841, whole genome shotgun sequence (44341 bp)
Overview 1 RT 1: 20235-25477 bp Neighborhood of RT #1 [20235, 25506] ACR3 DDE_Tnp_IS66_C RVT_N RVT-GII GIIM LZ_Tnp_IS66 zf-IS66 DDE_Tnp_IS66 TnpB_IS66 Feature: gene Location: 20235-21197 bp Feature: domain Description: ACR3 Location: 20250-21177 bp Feature: domain Description: ACR3 Location: 20250-21 1 77 bp Feature: gene Location: 21236-21370 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 21242-21353 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 21 242-21 353 bp Feature: gene Location: 21562-23223 bp Feature: RT Description: RVT_N Location: 21607-21850 bp Feature: RT Description: RVT_N Location: 21 607-21 850 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21895-22531 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21 895-22531 bp Feature: domain Description: GIIM Note: maturase Location: 22588-22816 bp Feature: domain Description: GIIM Note: maturase Location: 22588-2281 6 bp Feature: gene Location: 23781-25109 bp Feature: domain Description: LZ_Tnp_IS66 Location: 23913-24120 bp Feature: domain Description: LZ_Tnp_IS66 Location: 2391 3-241 20 bp Feature: domain Description: zf-IS66 Location: 24159-24273 bp Feature: domain Description: zf-IS66 Location: 241 59-24273 bp Feature: domain Description: DDE_Tnp_IS66 Location: 24315-25089 bp Feature: domain Description: DDE_Tnp_IS66 Location: 2431 5-25089 bp Feature: gene Location: 25171-25506 bp Feature: domain Description: TnpB_IS66 Location: 25189-25477 bp Feature: domain Description: TnpB_IS66 Location: 251 89-25477 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ACR3 (COG0798), DDE_Tnp_IS66_C (pfam13817), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), LZ_Tnp_IS66 (pfam13007), zf-IS66 (pfam13005), DDE_Tnp_IS66 (pfam03050), TnpB_IS66 (pfam05717)

Seq: JAAQWD010000042.1 Pseudomonas veronii strain WS 5113 42_29999_11.8142, whole genome shotgun sequence (29999 bp)
Overview 1 RT 1: 5034-8497 bp Neighborhood of RT #1 [5034, 8497] IS5 RVT-GII GIIM IS5 Feature: gene Location: 5034-5573 bp Feature: domain Description: IS5 Location: 5223-5550 bp Feature: domain Description: IS5 Location: 52 2 3-5550 bp Feature: gene Location: 5929-6069 bp Feature: gene Location: 6075-7334 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6279-6936 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 62 79-6936 bp Feature: domain Description: GIIM Note: maturase Location: 7014-7236 bp Feature: domain Description: GIIM Note: maturase Location: 7014-72 36 bp Feature: gene Location: 7244-7864 bp Feature: domain Description: IS5 Location: 7394-7838 bp Feature: domain Description: IS5 Location: 7394-7838 bp Feature: gene Location: 8294-8497 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT IS5 (COG3039), RVT-GII, GIIM (pfam08388)