myRT

myRT report for GCA_012985385.1_ASM1298538v1

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Seq: JAAQWI010000013.1 Pseudomonas sp. WS 5503 13_191053_20.6743, whole genome shotgun sequence (191053 bp)
Overview 1 RT 1: 165535-170786 bp Neighborhood of RT #1 [165535, 170806] TnpB_IS66 LZ_Tnp_IS66 zf-IS66 DDE_Tnp_IS66 RVT_N RVT-GII GIIM DDE_Tnp_IS66_C ACR3 Feature: gene Location: 165535-165870 bp Feature: domain Description: TnpB_IS66 Location: 165553-165841 bp Feature: domain Description: TnpB_IS66 Location: 1 65553-1 65841 bp Feature: gene Location: 165932-167260 bp Feature: domain Description: LZ_Tnp_IS66 Location: 166064-166271 bp Feature: domain Description: LZ_Tnp_IS66 Location: 1 66064-1 66271 bp Feature: domain Description: zf-IS66 Location: 166310-166424 bp Feature: domain Description: zf-IS66 Location: 1 6631 0-1 66424 bp Feature: domain Description: DDE_Tnp_IS66 Location: 166466-167240 bp Feature: domain Description: DDE_Tnp_IS66 Location: 1 66466-1 67240 bp Feature: gene Location: 167818-169479 bp Feature: RT Description: RVT_N Location: 167863-168106 bp Feature: RT Description: RVT_N Location: 1 67863-1 681 06 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 168151-168787 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 681 51 -1 68787 bp Feature: domain Description: GIIM Note: maturase Location: 168844-169072 bp Feature: domain Description: GIIM Note: maturase Location: 1 68844-1 69072 bp Feature: gene Location: 169671-169805 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 169677-169788 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 1 69677-1 69788 bp Feature: gene Location: 169844-170806 bp Feature: domain Description: ACR3 Location: 169859-170786 bp Feature: domain Description: ACR3 Location: 1 69859-1 70786 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TnpB_IS66 (pfam05717), LZ_Tnp_IS66 (pfam13007), zf-IS66 (pfam13005), DDE_Tnp_IS66 (pfam03050), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), DDE_Tnp_IS66_C (pfam13817), ACR3 (COG0798)

Seq: JAAQWI010000014.1 Pseudomonas sp. WS 5503 14_135571_17.2357, whole genome shotgun sequence (135571 bp)
Overview 1 RT 1: 98402-104306 bp Neighborhood of RT #1 [98402, 104306] MFS_ProP GlxA RVT-GII Feature: gene Location: 98402-99688 bp Feature: domain Description: MFS_ProP Location: 98441-99668 bp Feature: domain Description: MFS_ProP Location: 98441-99668 bp Feature: gene Location: 99775-100794 bp Feature: domain Description: GlxA Location: 99841-100780 bp Feature: domain Description: GlxA Location: 99841-100780 bp Feature: gene Location: 101521-103287 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 102205-102895 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 102 2 05-102 895 bp Feature: gene Location: 103398-103565 bp Feature: gene Location: 104157-104306 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, MFS_ProP (cd17366), GlxA (COG4977)