myRT

myRT report for GCA_012985945.1_ASM1298594v1

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Seq: JAAQXH010000005.1 Pseudomonas proteolytica strain WS 5148 5_265825_51.7641, whole genome shotgun sequence (265825 bp)
Overview 1 RT 1: 61509-66422 bp Neighborhood of RT #1 [61509, 66451] cztS_silS_copS DDE_Tnp_IS66_C RVT_N RVT-GII GIIM LZ_Tnp_IS66 zf-IS66 DDE_Tnp_IS66 TnpB_IS66 Feature: gene Location: 61509-61991 bp Feature: domain Description: cztS_silS_copS Location: 61515-61920 bp Feature: domain Description: cztS_silS_copS Location: 61 51 5-61 920 bp Feature: gene Location: 62138-62272 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 62144-62255 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 621 44-62255 bp Feature: gene Location: 62464-64125 bp Feature: RT Description: RVT_N Location: 62509-62752 bp Feature: RT Description: RVT_N Location: 62509-62752 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 62797-63433 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 62797-63433 bp Feature: domain Description: GIIM Note: maturase Location: 63490-63718 bp Feature: domain Description: GIIM Note: maturase Location: 63490-6371 8 bp Feature: gene Location: 64683-65969 bp Feature: domain Description: LZ_Tnp_IS66 Location: 64767-64980 bp Feature: domain Description: LZ_Tnp_IS66 Location: 64767-64980 bp Feature: domain Description: zf-IS66 Location: 65007-65133 bp Feature: domain Description: zf-IS66 Location: 65007-651 33 bp Feature: domain Description: DDE_Tnp_IS66 Location: 65175-65949 bp Feature: domain Description: DDE_Tnp_IS66 Location: 651 75-65949 bp Feature: gene Location: 66116-66451 bp Feature: domain Description: TnpB_IS66 Location: 66134-66422 bp Feature: domain Description: TnpB_IS66 Location: 661 34-66422 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT cztS_silS_copS (TIGR01386), DDE_Tnp_IS66_C (pfam13817), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), LZ_Tnp_IS66 (pfam13007), zf-IS66 (pfam13005), DDE_Tnp_IS66 (pfam03050), TnpB_IS66 (pfam05717)

Seq: JAAQXH010000074.1 Pseudomonas proteolytica strain WS 5148 74_8062_45.5069, whole genome shotgun sequence (8062 bp)
Overview 1 RT 1: 4695-7846 bp Neighborhood of RT #1 [4695, 7846] DUF1566 Avd_like RVT-DGRs Feature: gene Location: 4695-5315 bp Feature: domain Description: DUF1566 Location: 4944-5298 bp Feature: domain Description: DUF1566 Location: 4944-52 98 bp Feature: gene Location: 5370-5726 bp Feature: domain Description: Avd_like Location: 5397-5706 bp Feature: domain Description: Avd_like Location: 5397-5706 bp Feature: gene Location: 5980-7098 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 6190-6874 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 6190-6874 bp Feature: gene Location: 7109-7336 bp Feature: gene Location: 7409-7846 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1566 (pfam07603), Avd_like (cd16376), RVT-DGRs