myRT

myRT report for GCA_012986165.1_ASM1298616v1

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Seq: JAAQXR010000007.1 Pseudomonas oryzihabitans strain WS 5017 7_183648_7.70469, whole genome shotgun sequence (183648 bp)
Overview 1 RT 1: 68388-75384 bp Neighborhood of RT #1 [68388, 75428] PRK00220 PRK09604 RVT_N RVT-GII GIIM HNH RpsU dnaG Feature: gene Location: 68388-69062 bp Feature: domain Description: PRK00220 Location: 68496-69057 bp Feature: domain Description: PRK00220 Location: 68496-69057 bp Feature: gene Location: 69108-70310 bp Feature: domain Description: PRK09604 Location: 69288-70302 bp Feature: domain Description: PRK09604 Location: 69288-70302 bp Feature: gene Location: 71298-72986 bp Feature: RT Description: RVT_N Location: 71355-71598 bp Feature: RT Description: RVT_N Location: 71 355-71 598 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 71643-72279 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 71 643-72279 bp Feature: domain Description: GIIM Note: maturase Location: 72333-72564 bp Feature: domain Description: GIIM Note: maturase Location: 72333-72564 bp Feature: domain Description: HNH Note: nucleases Location: 72816-72954 bp Feature: domain Description: HNH Note: nucleases Location: 7281 6-72954 bp Feature: gene Location: 73154-73369 bp Feature: domain Description: RpsU Location: 73157-73355 bp Feature: domain Description: RpsU Location: 731 57-73355 bp Feature: gene Location: 73521-75428 bp Feature: domain Description: dnaG Location: 73530-75384 bp Feature: domain Description: dnaG Location: 73530-75384 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK00220 (glycerol-3-phosphate 1-O-acyltransferase PlsY), PRK09604 (tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844), RpsU (COG0828), dnaG (TIGR01391)