myRT

myRT report for GCA_012986275.1_ASM1298627v1

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Seq: JAAQXX010000015.1 Psychrobacter sp. FME2 strain WS 5119 15_105924_51.0524, whole genome shotgun sequence (105924 bp)
Overview 1 RT 1: 7753-12403 bp Neighborhood of RT #1 [7753, 12543] TnpB_IS66 LZ_Tnp_IS66 zf-IS66 DDE_Tnp_IS66 RVT_N RVT-GII GIIM DDE_Tnp_IS66_C TpbA-like Feature: gene Location: 7753-8088 bp Feature: domain Description: TnpB_IS66 Location: 7771-8059 bp Feature: domain Description: TnpB_IS66 Location: 7771 -8059 bp Feature: gene Location: 8150-9520 bp Feature: domain Description: LZ_Tnp_IS66 Location: 8318-8531 bp Feature: domain Description: LZ_Tnp_IS66 Location: 831 8-8531 bp Feature: domain Description: zf-IS66 Location: 8558-8684 bp Feature: domain Description: zf-IS66 Location: 8558-8684 bp Feature: domain Description: DDE_Tnp_IS66 Location: 8726-9500 bp Feature: domain Description: DDE_Tnp_IS66 Location: 8726-9500 bp Feature: gene Location: 10078-11739 bp Feature: RT Description: RVT_N Location: 10123-10366 bp Feature: RT Description: RVT_N Location: 1 01 23-1 0366 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10411-11047 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 041 1 -1 1 047 bp Feature: domain Description: GIIM Note: maturase Location: 11104-11332 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 1 04-1 1 332 bp Feature: gene Location: 11931-12065 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 11937-12048 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 1 1 937-1 2048 bp Feature: gene Location: 12121-12543 bp Feature: domain Description: TpbA-like Location: 12151-12403 bp Feature: domain Description: TpbA-like Location: 1 21 51 -1 2403 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), DDE_Tnp_IS66_C (pfam13817), TpbA-like (cd14529), TnpB_IS66 (pfam05717), LZ_Tnp_IS66 (pfam13007), zf-IS66 (pfam13005), DDE_Tnp_IS66 (pfam03050)

Seq: JAAQXX010000024.1 Psychrobacter sp. FME2 strain WS 5119 24_81344_54.968, whole genome shotgun sequence (81344 bp)
Overview 1 RT 1: 21527-24375 bp Neighborhood of RT #1 [21527, 24375] DUF1566 Avd_like RVT-DGRs Feature: gene Location: 21527-22144 bp Feature: domain Description: DUF1566 Location: 21764-22124 bp Feature: domain Description: DUF1566 Location: 2 1764-2 2 12 4 bp Feature: gene Location: 22199-22555 bp Feature: domain Description: Avd_like Location: 22226-22535 bp Feature: domain Description: Avd_like Location: 2 2 2 2 6-2 2 535 bp Feature: gene Location: 22768-23928 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 23020-23704 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2 302 0-2 3704 bp Feature: gene Location: 23964-24131 bp Feature: gene Location: 24133-24375 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1566 (pfam07603), Avd_like (cd16376), RVT-DGRs