myRT

myRT report for GCA_012986465.1_ASM1298646v1

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Seq: JAAQYH010000013.1 Pseudomonas lactis strain WS 5405 13_213995_25.3236, whole genome shotgun sequence (213995 bp)
Overview 1 RT 1: 191201-198095 bp Neighborhood of RT #1 [191201, 198103] PRK10792 RVT_N RVT-GII GIIM HNH tig clpP Feature: gene Location: 191201-192055 bp Feature: domain Description: PRK10792 Location: 191204-192050 bp Feature: domain Description: PRK1 0792 Location: 1 91 204-1 92050 bp Feature: gene Location: 192659-192946 bp Feature: gene Location: 194235-195938 bp Feature: RT Description: RVT_N Location: 194292-194535 bp Feature: RT Description: RVT_N Location: 1 94292-1 94535 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 194580-195216 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 94580-1 9521 6 bp Feature: domain Description: GIIM Note: maturase Location: 195267-195501 bp Feature: domain Description: GIIM Note: maturase Location: 1 95267-1 95501 bp Feature: domain Description: HNH Note: nucleases Location: 195753-195891 bp Feature: domain Description: HNH Note: nucleases Location: 1 95753-1 95891 bp Feature: gene Location: 196066-197376 bp Feature: domain Description: tig Location: 196069-197347 bp Feature: domain Description: tig Location: 1 96069-1 97347 bp Feature: gene Location: 197468-198103 bp Feature: domain Description: clpP Location: 197522-198095 bp Feature: domain Description: clpP Location: 1 97522-1 98095 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10792 (bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844), tig (TIGR00115), clpP

Seq: JAAQYH010000009.1 Pseudomonas lactis strain WS 5405 9_331338_33.9218, whole genome shotgun sequence (331338 bp)
Overview 1 RT 1: 30168-35419 bp Neighborhood of RT #1 [30168, 35439] TnpB_IS66 LZ_Tnp_IS66 zf-IS66 DDE_Tnp_IS66 RVT_N RVT-GII GIIM DDE_Tnp_IS66_C ACR3 Feature: gene Location: 30168-30503 bp Feature: domain Description: TnpB_IS66 Location: 30186-30474 bp Feature: domain Description: TnpB_IS66 Location: 30186-30474 bp Feature: gene Location: 30565-31893 bp Feature: domain Description: LZ_Tnp_IS66 Location: 30697-30904 bp Feature: domain Description: LZ_Tnp_IS66 Location: 30697-30904 bp Feature: domain Description: zf-IS66 Location: 30943-31057 bp Feature: domain Description: zf-IS66 Location: 30943-31057 bp Feature: domain Description: DDE_Tnp_IS66 Location: 31099-31873 bp Feature: domain Description: DDE_Tnp_IS66 Location: 31099-31873 bp Feature: gene Location: 32451-34112 bp Feature: RT Description: RVT_N Location: 32496-32739 bp Feature: RT Description: RVT_N Location: 32 496-32 739 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32784-33420 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32 784-3342 0 bp Feature: domain Description: GIIM Note: maturase Location: 33477-33705 bp Feature: domain Description: GIIM Note: maturase Location: 33477-33705 bp Feature: gene Location: 34304-34438 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 34310-34421 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 34310-3442 1 bp Feature: gene Location: 34477-35439 bp Feature: domain Description: ACR3 Location: 34492-35419 bp Feature: domain Description: ACR3 Location: 34492 -35419 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TnpB_IS66 (pfam05717), LZ_Tnp_IS66 (pfam13007), zf-IS66 (pfam13005), DDE_Tnp_IS66 (pfam03050), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), DDE_Tnp_IS66_C (pfam13817), ACR3 (COG0798)