myRT

myRT report for GCA_012986505.1_ASM1298650v1

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Seq: JAAQYG010000034.1 Psychrobacter sp. FME2 strain WS 5024 34_52792_8.56933, whole genome shotgun sequence (52792 bp)
Overview 1 RT 1: 18954-23374 bp Neighborhood of RT #1 [18954, 23374] CHD RVT-UG12 Feature: gene Location: 18954-19301 bp Feature: gene Location: 19362-20180 bp Feature: domain Description: CHD Location: 19383-19887 bp Feature: domain Description: CHD Location: 1 9383-1 9887 bp Feature: gene Location: 20667-22385 bp Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 21003-21459 bp Feature: RT Description: RVT-UG1 2 Note: UG1 2 RT Location: 21 003-21 459 bp Feature: gene Location: 22504-22914 bp Feature: gene Location: 23111-23374 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CHD (cd07302), RVT-UG12

Seq: JAAQYG010000042.1 Psychrobacter sp. FME2 strain WS 5024 42_22009_8.57102, whole genome shotgun sequence (22009 bp)
Overview 1 RT 1: 17529-21886 bp Neighborhood of RT #1 [17529, 21886] MvaT_DBD OYE_like_FMN RVT-UG12 TAS_TAS_TAS_TIGR02293 Feature: gene Location: 17529-17897 bp Feature: domain Description: MvaT_DBD Location: 17769-17889 bp Feature: domain Description: MvaT_DBD Location: 17769-17889 bp Feature: gene Location: 18206-19333 bp Feature: domain Description: OYE_like_FMN Location: 18218-19274 bp Feature: domain Description: OYE_like_FMN Location: 182 18-192 74 bp Feature: gene Location: 19378-21087 bp Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 19714-20170 bp Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 19714-2 0170 bp Feature: gene Location: 21248-21487 bp Feature: domain Description: TAS_TAS_TAS_TIGR02293 Location: 21269-21458 bp Feature: domain Description: TAS_TAS_TAS_TIGR02 2 93 Location: 2 12 69-2 1458 bp Feature: gene Location: 21674-21886 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MvaT_DBD (cl40688), OYE_like_FMN (cd02933), RVT-UG12, TAS_TAS_TAS_TIGR02293

Seq: JAAQYG010000009.1 Psychrobacter sp. FME2 strain WS 5024 9_173694_9.43974, whole genome shotgun sequence (173694 bp)
Overview 1 RT 1: 6697-12816 bp 2 RT 2: 18475-24252 bp Neighborhood of RT #1 [6697, 12842] SLATT_5 RVT-UG17 HNH_5 DUF5623 Neighborhood of RT #2 [18475, 24252] RVT-Retrons Feature: gene Location: 6697-7653 bp Feature: gene Location: 8011-8577 bp Feature: domain Description: SLATT_5 Location: 8020-8548 bp Feature: domain Description: SLATT_5 Location: 8020-8548 bp Feature: gene Location: 8574-9938 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 8802-9405 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 8802-9405 bp Feature: gene Location: 10005-11402 bp Feature: domain Description: HNH_5 Location: 10026-10143 bp Feature: domain Description: HNH_5 Location: 10026-10143 bp Feature: gene Location: 11511-12842 bp Feature: domain Description: DUF5623 Location: 12492-12816 bp Feature: domain Description: DUF5623 Location: 12492-12816 bp Feature: gene Location: 18475-19884 bp Feature: gene Location: 20108-21409 bp Feature: gene Location: 21599-22765 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 21854-22502 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 21854-22502 bp Feature: gene Location: 22852-23664 bp Feature: gene Location: 23923-24252 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SLATT_5 (pfam18160), RVT-UG17, HNH_5 (pfam14279), DUF5623 (pfam18536), RVT-Retrons