myRT

myRT report for GCA_012986545.1_ASM1298654v1

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Seq: JAAQYJ010000003.1 Pseudomonas lactis strain WS 5000 3_892675_16.8167, whole genome shotgun sequence (892675 bp)
Overview 1 RT 1: 600570-604848 bp Neighborhood of RT #1 [600570, 604848] RVT-G2L4 Feature: gene Location: 600570-600785 bp Feature: gene Location: 600910-601140 bp Feature: gene Location: 601791-603053 bp Feature: RT Description: RVT-G2L4 Note: G2L4 RT Location: 602010-602595 bp Feature: RT Description: RVT-G2L4 Note: G2L4 RT Location: 60201 0-602595 bp Feature: gene Location: 603090-603308 bp Feature: gene Location: 604615-604848 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-G2L4

Seq: JAAQYJ010000004.1 Pseudomonas lactis strain WS 5000 4_783752_20.0006, whole genome shotgun sequence (783752 bp)
Overview 1 RT 1: 24558-32805 bp Neighborhood of RT #1 [24558, 32855] COG3178 RVT_N RVT-GII GIIM HNH LptD PRK10770 Feature: gene Location: 24558-25583 bp Feature: domain Description: COG3178 Location: 24579-25575 bp Feature: domain Description: COG3178 Location: 2 4579-2 5575 bp Feature: gene Location: 26398-26562 bp Feature: gene Location: 26887-28587 bp Feature: domain Description: RVT_N Location: 26944-27187 bp Feature: domain Description: RVT_N Location: 2 6944-2 7187 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 27232-27868 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 72 32 -2 7868 bp Feature: domain Description: GIIM Note: maturase Location: 27919-28153 bp Feature: domain Description: GIIM Note: maturase Location: 2 7919-2 8153 bp Feature: domain Description: HNH Note: nucleases Location: 28405-28543 bp Feature: domain Description: HNH Note: nucleases Location: 2 8405-2 8543 bp Feature: gene Location: 28739-31540 bp Feature: domain Description: LptD Location: 29078-31523 bp Feature: domain Description: LptD Location: 2 9078-3152 3 bp Feature: gene Location: 31515-32855 bp Feature: domain Description: PRK10770 Location: 31599-32805 bp Feature: domain Description: PRK10770 Location: 31599-32 805 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3178 (Predicted phosphotransferase, aminoglycoside/choline kinase (APH/ChoK) family ), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844), LptD (COG1452), PRK10770 (peptidyl-prolyl cis-trans isomerase SurA; Provisional)