myRT

myRT report for GCA_012986655.1_ASM1298665v1

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Seq: JAAQYO010000021.1 Pseudomonas gessardii strain WS 5049 21_113532_50.2832, whole genome shotgun sequence (113532 bp)
Overview 1 RT 1: 8197-12577 bp Neighborhood of RT #1 [8197, 12577] ABC_phnC DUF772 RVT-GII GIIM Feature: gene Location: 8197-9024 bp Feature: domain Description: ABC_phnC Location: 8227-8941 bp Feature: domain Description: ABC_phnC Location: 8227-8941 bp Feature: gene Location: 9367-9798 bp Feature: domain Description: DUF772 Location: 9517-9712 bp Feature: domain Description: DUF772 Location: 951 7-971 2 bp Feature: gene Location: 10398-11666 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10611-11268 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 061 1 -1 1 268 bp Feature: domain Description: GIIM Note: maturase Location: 11346-11568 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 346-1 1 568 bp Feature: gene Location: 11816-12214 bp Feature: gene Location: 12398-12577 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), ABC_phnC (TIGR02315), DUF772 (pfam05598)

Seq: JAAQYO010000023.1 Pseudomonas gessardii strain WS 5049 23_110973_47.6598, whole genome shotgun sequence (110973 bp)
Overview 1 RT 1: 70349-77291 bp Neighborhood of RT #1 [70349, 77291] PRK10770 LptD RVT_N RVT-GII GIIM HNH Feature: gene Location: 70349-71647 bp Feature: domain Description: PRK10770 Location: 70394-71597 bp Feature: domain Description: PRK10770 Location: 70394-71597 bp Feature: gene Location: 71664-74441 bp Feature: domain Description: LptD Location: 72006-74424 bp Feature: domain Description: LptD Location: 72 006-7442 4 bp Feature: gene Location: 74585-76294 bp Feature: RT Description: RVT_N Location: 74642-74885 bp Feature: RT Description: RVT_N Location: 74642 -74885 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 74930-75566 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 74930-75566 bp Feature: domain Description: GIIM Note: maturase Location: 75617-75851 bp Feature: domain Description: GIIM Note: maturase Location: 75617-75851 bp Feature: domain Description: HNH Note: nucleases Location: 76103-76241 bp Feature: domain Description: HNH Note: nucleases Location: 76103-762 41 bp Feature: gene Location: 76618-76782 bp Feature: gene Location: 77133-77291 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10770 (peptidyl-prolyl cis-trans isomerase SurA; Provisional), LptD (COG1452), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844)

Seq: JAAQYO010000027.1 Pseudomonas gessardii strain WS 5049 27_96753_46.1789, whole genome shotgun sequence (96753 bp)
Overview 1 RT 1: 51877-55028 bp Neighborhood of RT #1 [51877, 55045] RVT-DGRs Avd_like DUF1566 Feature: gene Location: 51877-52296 bp Feature: gene Location: 52391-52636 bp Feature: gene Location: 52639-53760 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 52849-53533 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 52849-53 53 3 bp Feature: gene Location: 54014-54370 bp Feature: domain Description: Avd_like Location: 54041-54350 bp Feature: domain Description: Avd_like Location: 54041-543 50 bp Feature: gene Location: 54425-55045 bp Feature: domain Description: DUF1566 Location: 54662-55028 bp Feature: domain Description: DUF1566 Location: 54662-55028 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, Avd_like (cd16376), DUF1566 (pfam07603)