myRT

myRT report for GCA_012999505.1_ASM1299950v1

Download annotations/find similar RTs

Seq: JABEEC010000001.1 Salinisphaera sp. USBA-960 strain USBA-874 NODE_1_length_2209425_cov_215.863, whole genome shotgun sequence (2209425 bp)
Overview 1 RT 1: 15968-20306 bp 2 RT 2: 130282-132357 bp Neighborhood of RT #1 [15968, 20593] FII FI RVT-DGRs PHA00653 Neighborhood of RT #2 [130282, 132357] PBP2_OpuAC_like RVT-GII Feature: gene Location: 15968-16477 bp Feature: domain Description: FII Location: 15971-16472 bp Feature: domain Description: FII Location: 1 5971 -1 6472 bp Feature: gene Location: 16490-17665 bp Feature: domain Description: FI Location: 16493-17654 bp Feature: domain Description: FI Location: 1 6493-1 7654 bp Feature: gene Location: 17776-18813 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 17989-18595 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1 7989-1 8595 bp Feature: gene Location: 18927-19346 bp Feature: gene Location: 19490-20593 bp Feature: domain Description: PHA00653 Location: 19703-20306 bp Feature: domain Description: PHA00653 Location: 1 9703-20306 bp Feature: gene Location: 130282-131193 bp Feature: domain Description: PBP2_OpuAC_like Location: 130396-131173 bp Feature: domain Description: PBP2_OpuAC_like Location: 1 30396-1 31 1 73 bp Feature: gene Location: 131208-131411 bp Feature: gene Location: 131581-131871 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 131611-131866 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 31 61 1 -1 31 866 bp Feature: gene Location: 131938-132186 bp Feature: gene Location: 132229-132357 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FII (PHA02600), FI (PHA02560), RVT-DGRs, PHA00653 (mtd;major tropism determinant), PBP2_OpuAC_like (cd13639), RVT-GII